Published February 3, 2026 | Version 1.0.2
Software Open

akikuno/TSUMUGI-dev: 1.0.2

Authors/Creators

  • 1. University of Tsukuba

Description

v1.0.2 (2026-02-03)

🐛 Bug Fixes

  • Fix inconsistent phenotype_shared_annotations types (list[dict])
    Issue: #150
    Thanks @kinari-labwork for reporting the issue!!

  • Update template paths in webapp_builder.py to reflect current directory structure. Issue: #154

  • Use Jaccard index in _calculate_pair_worker for pairwise similarity computation.
    Issue: #156

🔧 Maintenance

  • Rename pairwise_similarity_annotations key from "phenotype" to "mp_term_name".
    Issue: #151

  • Automate E2E tests for the TSUMUGI subcommand using GitHub Actions
    Issue: #152

  • Restrict tsumugi genes input to text files only for better maintainability.
    Issue: #153

  • Require explicit --genewise or --pairwise option for tsumugi genes and mp commands.
    Issue: #155

Files

akikuno/TSUMUGI-dev-1.0.2.zip

Files (2.2 MB)

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md5:fa9477eae14fc9153d028d6b90d8c466
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Additional details

Related works

Is supplement to
Software: https://github.com/akikuno/TSUMUGI-dev/tree/1.0.2 (URL)

Software

Repository URL
https://github.com/akikuno/TSUMUGI-dev