Published February 2, 2026
| Version 2.2.0
Software
Open
nf-core/hlatyping: 2.2.0 - Holocron
Authors/Creators
- 1. QBiC @qbicsoftware
- 2. Boehringer Ingelheim
- 3. Peptide-based Immunotherapy
- 4. Innsbruck Medical University
- 5. CLEVELAND CLINIC
- 6. @seqeralabs
- 7. @qbicsoftware
- 8. Seqera Labs
- 9. Robert Bosch GmbH
Description
Added
- #201 - Option to run HLA-HD (v1.7.1) for Class I and Class II HLA typing (@riederd)
- #204 - CI tests for HLA-HD using encrypted licensed software, following nf-core external tool pattern (@jonasscheid)
Changed
- #202 - Merge nf-core template updates up to
3.5.1(@jonasscheid)
Fixed
- #207 - Fix conda tests by updating Nextflow to 25.04.2 (@jonasscheid)
- #208 - Fix conda tests by pinning pytables<3.10 (@jonasscheid)
Dependencies
| Dependency | Old version | New version |
| ---------- | ----------- | ----------- |
| HLA-HD | - | 1.7.1 |
| MultiQC | 1.27.0 | 1.33.0 |
| nf-core | 3.2.0 | 3.5.1 |
| Nextflow | 24.04.2 | 25.04.2 |
Files
nf-core/hlatyping-2.2.0.zip
Files
(7.5 MB)
| Name | Size | Download all |
|---|---|---|
|
md5:f9a578f3365754fff899238f8c43c3d0
|
7.5 MB | Preview Download |
Additional details
Related works
- Is supplement to
- Software: https://github.com/nf-core/hlatyping/tree/2.2.0 (URL)
Software
- Repository URL
- https://github.com/nf-core/hlatyping