Cdiutils: A python package for Bragg Coherent Diffraction Imaging processing, analysis and visualisation workflows

A python package to help Bragg Coherent Diffraction Imaging (BCDI) practitioners in their analysis and visualisation workflows. The package is designed to handle the three primary stages of a BCDI data processing workflow: * **Proprocessing** (data centering and cropping) * **Phase retrieval**: utilises PyNX for phasing (refer to [PyNX documentation](http://ftp.esrf.fr/pub/scisoft/PyNX/doc/)). * **Post processing** (orthogonalisation, phase manipulation, strain computation etc.) It is assumed that the phase retrieval is conducted using the PyNX package. The `BcdiPipeline` class runs all three stages and can manage connections to different machines, especially for GPU-based phase retrieval.