Published January 27, 2026
| Version ReblockGVCF_develop
Software
Open
github.com/broadinstitute/warp/Optimus
Authors/Creators
Description
The optimus 3' pipeline processes 10x genomics sequencing data based on the v2 chemistry. It corrects cell barcodes and UMIs, aligns reads, marks duplicates, and returns data as alignments in BAM format and as counts in sparse matrix exchange format.
Files
github.com-broadinstitute-warp-Optimus_ReblockGVCF_develop.zip
Files
(28.6 kB)
| Name | Size | Download all |
|---|---|---|
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md5:9ee788b08fc582b709005787fa4e5e76
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Additional details
Related works
- Is identical to
- https://dockstore.org/aliases/workflow-versions/10.5281-zenodo.18394290 (URL)
- https://dockstore.org/workflows/github.com/broadinstitute/warp/Optimus:ReblockGVCF_develop (URL)
- https://dockstore.org/api/ga4gh/trs/v2/tools/%23workflow%2Fgithub.com%2Fbroadinstitute%2Fwarp%2FOptimus/versions/ReblockGVCF_develop/PLAIN-WDL/descriptor/Optimus.wdl (URL)