Published January 23, 2026
| Version v1.0
Software
Open
github.com/iwc-workflows/metagenomic-raw-reads-amr-analysis/main
Authors/Creators
- 1. Laboratoire des Sciences du Numérique de Nantes
Description
This workflow starts from metagenomics short-read data and performs, taxonomic profiling (using Sylph), predicts Antibiotic Resistance Genes (ARGs) (using Groot and deepARG), and standardizes ARG annotations (using argNorm).
Files
github.com-iwc-workflows-metagenomic-raw-reads-amr-analysis-main_v1.0.zip
Files
(10.3 kB)
| Name | Size | Download all |
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md5:bec7afdd15a0f4fc37d432a92e2f30bf
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Additional details
Related works
- Is identical to
- https://dockstore.org/aliases/workflow-versions/10.5281-zenodo.18349621 (URL)
- https://dockstore.org/workflows/github.com/iwc-workflows/metagenomic-raw-reads-amr-analysis/main:v1.0 (URL)
- https://dockstore.org/api/ga4gh/trs/v2/tools/%23workflow%2Fgithub.com%2Fiwc-workflows%2Fmetagenomic-raw-reads-amr-analysis%2Fmain/versions/v1.0/PLAIN-gxformat2/descriptor/metagenomic-raw-reads-amr-analysis.ga (URL)