Published January 22, 2026
| Version v2.14.2
Software
Open
epi2me-labs/wf-metagenomics: v2.14.2
Authors/Creators
- 1. Oxford Nanopore Technologies
- 2. @Birkbeck
- 3. @nanoporetech
Description
Changed
- Updated to wf-template v5.7.0 to maintain compliance with our latest wf-template standard, changing:
- Pipeline overview now appears before pipeline parameters in README.
- ezCharts plotting library has been updated to 0.15.1, there are no user facing changes to plots.
- Fastcat FASTQ pre-processing program has been updated to 0.24.2, it is more robust to malformed FASTQ input.
- CHANGELOG to be compliant with our formatting rules.
Added
- Greengenes2 database: the database used in the recent ZymoBIOMICS Microbial Communities with 16S dataset blog post is now available as "Greengenes2_plus".
- Workflow overview diagram in the documentation.
- Comprehensive database reference table to the README with citations and resource links.
Fixed
- Missing ranks when the user-selected
taxonomic_rankwas deeper than the maximum rank available for a given taxon in the database.
Files
epi2me-labs/wf-metagenomics-v2.14.2.zip
Files
(84.7 MB)
| Name | Size | Download all |
|---|---|---|
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md5:c9ea348e5507fb22465e4881dec18631
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Additional details
Related works
- Is supplement to
- Software: https://github.com/epi2me-labs/wf-metagenomics/tree/v2.14.2 (URL)
Software
- Repository URL
- https://github.com/epi2me-labs/wf-metagenomics