Data for: Advanced Spectral Deconvolution of Serum ATR-FTIR Highlight the Serum nucleic acid in Early Sepsis Diagnostics and its cfDNA Characterization
Authors/Creators
Description
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DATASET README: Serum ATR-FTIR Spectral Features for Sepsis Diagnostics
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1. GENERAL INFORMATION
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Title: Advanced Spectral Deconvolution of Serum ATR-FTIR Highlight the Serum nucleic acid in Early Sepsis Diagnostics and its cfDNA Characterization
Authors: Xuejie Wang, Wei Xin, Tangdong Chen, et al.
2. DATASET STRUCTURE & HIERARCHY
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The data is organized into two primary modules:
A. Mouse_CLP_Data (Sepsis Mouse Model)
|-- CLP_Mouse_Dynamic_Progression/
| |-- Raw_Spectra/ (Original .spa and .csv files from 30m to 1w post-CLP)
| |-- Processed_Spectra/ (Baseline corrected and smoothed spectra)
| |-- Mouse_Dynamic_Peak_Area.xlsx (Integrated area of 1140-1000 cm-1 region)
| |-- Mouse_Dynamic_GFEB_Features.xlsx (Deconvoluted Gaussian band features)
|-- CLP_Mouse_Outcomes/
| |-- Raw_Spectra/
| |-- Processed_Spectra/
| |-- CLP_Mouse_Outcomes_Metadata.xlsx (Survival, temperature, weight data)
| |-- Mouse_Outcomes_Peak_Area.xlsx
| |-- Mouse_Outcomes_GFEB_Features.xlsx
B. Patients_Data (Clinical Validation)
|-- Patient_Clinical_Information.xlsx (Anonymized: PCT, IL-6, SOFA, etc.)
|-- Patients_Spectral_Data/
|-- Raw_Spectra/ (Sepsis, Control, and cfDNA groups)
|-- Processed_Spectra/ (Sepsis, Control, and cfDNA groups)
|-- Patients_Peak_Area.xlsx (Feature matrix for diagnostic models)
|-- Patients_GFEB_Features.xlsx (Features for ML classification)
|-- cfDNA_Analysis_Subfolder/
|-- cfDNA_Peak_Area.xlsx
|-- cfDNA_GFEB_Features.xlsx
|-- cfDNA_UV_Concentration.xlsx (UV spectrophotometry reference)
3. METHODOLOGICAL SPECIFICATIONS
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- Instrumentation: Thermo Fisher Scientific Nicolet iS50 (ATR mode)
- Spectral
4. CONTACT
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For questions regarding data or code, please contact:
Guoqiang Bao (guoqiang@fmmu.edu.cn) or Lijuan Yuan (lijuanyuan@fmmu.edu.cn).