FREEDA genome assemblies (NCBI GenBank) - Rodents - Reference genome
Authors/Creators
Description
Description
This record provides a curated snapshot of public NCBI GenBank genome assembly FASTA files used as reference inputs for the FREEDA pipeline. Assemblies are redistributed unchanged for convenience and reproducibility.
Provenance and identifiers: Each genome is identified by its NCBI GenBank assembly accession and version as listed in FREEDA_genomes.xlsx, along with the corresponding NCBI Assembly URLs. Users should cite the original genome resources via their accessions and any associated primary publications.
Rights note: NCBI places no restrictions on the use or distribution of GenBank molecular data, but notes that some original submitters (or countries of origin) may assert patent/copyright/other IP claims in portions of submitted data; users are responsible for compliance where applicable.
Related work: This dataset supports the FREEDA pipeline described in: https://doi.org/10.1083/jcb.202212084 (added under “Related works”).
Files
Files
(2.8 GB)
| Name | Size | Download all |
|---|---|---|
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md5:c5e676beee556f05f26b64a225cb3bee
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20.4 kB | Download |
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md5:c59ed4d4adf94d5d595b8e481e99bab1
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2.8 GB | Download |
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md5:3ad4d759b7f4717758ca4053c5070314
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21.1 kB | Download |
Additional details
Related works
- Is supplement to
- Journal article: 10.1083/jcb.202212084 (DOI)
Software
- Repository URL
- https://github.com/DDudka9/freeda