Published January 13, 2026
| Version v2.5.21.0
Software
Open
github.com/broadinstitute/viral-pipelines/sarscov2_gisaid_ingest
Authors/Creators
Description
Sanitize data downloaded from GISAID for use in Nextstrain/augur. See: https://nextstrain.github.io/ncov/data-prep#curate-data-from-the-full-gisaid-database
Files
github.com-broadinstitute-viral-pipelines-sarscov2_gisaid_ingest_v2.5.21.0.zip
Files
(26.7 kB)
| Name | Size | Download all |
|---|---|---|
|
md5:df2c64eef3541d8d2043a4ecfa91c5af
|
26.7 kB | Preview Download |
Additional details
Related works
- Is identical to
- https://dockstore.org/aliases/workflow-versions/10.5281-zenodo.18236436 (URL)
- https://dockstore.org/workflows/github.com/broadinstitute/viral-pipelines/sarscov2_gisaid_ingest:v2.5.21.0 (URL)
- https://dockstore.org/api/ga4gh/trs/v2/tools/%23workflow%2Fgithub.com%2Fbroadinstitute%2Fviral-pipelines%2Fsarscov2_gisaid_ingest/versions/v2.5.21.0/PLAIN-WDL/descriptor/sarscov2_gisaid_ingest.wdl (URL)