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Table 1 in Morphological and molecular identification of Diaporthe species in south-western China, with description of eight new species
Authors/Creators
- 1. College of Life Sciences, Yangtze University, Jingzhou 434025, Hubei, China
- 2. Shandong Provincial Key Laboratory for Biology of Vegetable Diseases and Insect Pests, College of Plant Protection, Shandong Agricultural University, Taian, Shandong, 271018, China
Description
Table 1. Species and GenBank accession numbers of DNA sequences used in this study with new sequences in bold.
| Species | Strain/Isolate | Host/Substrate | GenBank accession number | ||||
|---|---|---|---|---|---|---|---|
| ITS | TUB | TEF | CAL | HIS | |||
| Diaporthe alnea | CBS 146.46* | Alnus sp. | KC343008 | KC343976 | KC343734 | KC343250 | KC343492 |
| D. anacardii | CBS 720.97* | Anacardium occidentale | KC343024 | KC343992 | KC343750 | KC343266 | KC343508 |
| D. baccae | CBS 136972* | Vaccinium corymbosum | KJ160565 | - | KJ160597 | - | - |
| D. batatas | CBS 122.21 | Ipomoea batatas | KC343040 | KC344008 | KC343766 | KC343282 | KC343524 |
| D. camelliae-sinensis | SAUCC194.92 * | Camellia sinensis | MT822620 | MT855817 | MT855932 | MT855699 | MT855588 |
| SAUCC194.103 | Castanea mollissima | MT822631 | MT855828 | MT855943 | MT855710 | MT855599 | |
| SAUCC194.104 | Castanea mollissima | MT822632 | MT855829 | MT855944 | MT855711 | MT855600 | |
| SAUCC194.108 | Machilus pingii | MT822636 | MT855833 | MT855948 | MT855715 | MT855603 | |
| D. canthii | CBS 132533* | Canthium inerme | JX069864 | KC843230 | KC843120 | KC843174 | - |
| D. chamaeropis | CBS 753.70 | Spartium junceum | KC343049 | KC344017 | KC343775 | KC343291 | KC343533 |
| D. cinerascens | CBS 719.96 | Ficus carica | KC343050 | KC344018 | KC343776 | KC343292 | KC343534 |
| D. cissampeli | CPC 27302 | Cissampelos capensis | KX228273 | KX228384 | - | - | KX228366 |
| D. citri | CBS 230.52 | Citrus sinensis | KC343052 | KC344020 | KC343778 | KC343294 | KC343536 |
| D. collariana | MFLUCC 17-2636* | Magnolia champaca | MG806115 | MG783041 | MG783040 | MG783042 | - |
| D. convolvuli | CBS 124654 | Convolvulus arvensis | KC343054 | KC344022 | KC343780 | KC343296 | KC343538 |
| D. cytosporella | AR 5149 | Citrus sinensis | KC843309 | KC843223 | KC843118 | KC843143 | - |
| D. destruens | SPPD-1 | Solanum tuberosum | JN848791 | JX421691 | - | - | - |
| D. dorycnii | MFLU 17-1015* | Dorycnium hirsutum | KY964215 | KY964099 | KY964171 | - | - |
| D. elaeagni | CBS 504.72 | Elaeagnus sp. | KC343064 | KC344032 | KC343790 | KC343306 | KC343548 |
| D. elaeagni-glabrae | LC4802* | Elaeagnus glabra | KX986779 | KX999212 | KX999171 | KX999281 | KX999251 |
| D. endophytica | CBS 133811* | Schinus terebinthifolius | KC343065 | KC344033 | KC343791 | KC343307 | KC343549 |
| D. eres | AR5193* | Ulmus laevis | KJ210529 | KJ420799 | KJ210550 | KJ434999 | KJ420850 |
| D. foeniculina | CBS 123208 | Foeniculum vulgare | KC343104 | KC344072 | KC343830 | KC343346 | KC343588 |
| D. fructicola | MAFF 246408 | Passiflora edulis | LC342734 | LC342736 | LC342735 | LC342738 | LC342737 |
| D. grandiflori | SAUCC194.84 * | Heterostemma grandiflorum | MT822612 | MT855809 | MT855924 | MT855691 | MT855580 |
| D. heliconiae | SAUCC194.75 | Heliconia metallica | MT822603 | MT855800 | MT855915 | MT855682 | MT855571 |
| SAUCC194.77 * | Heliconia metallica | MT822605 | MT855802 | MT855917 | MT855684 | MT855573 | |
| D. heterophyllae | CPC 26215 | Acacia heterophylla | MG600222 | MG600226 | MG600224 | MG600218 | MG600220 |
| D. heterostemmatis | SAUCC194.85 * | Heterostemma grandiflorum | MT822613 | MT855810 | MT855925 | MT855692 | MT855581 |
| SAUCC194.102 | Camellia sinensis | MT822630 | MT855827 | MT855942 | MT855709 | MT855598 | |
| D. hickoriae | CBS 145.26* | Carya glabra | KC343118 | KC344086 | KC343844 | KC343360 | KC343602 |
| D. inconspicua | CBS 133813* | Maytenus ilicifolia | KC343123 | KC344091 | KC343849 | KC343365 | KC343607 |
| D. kongii | T12509H* | Helianthus annuus | JF431301 | KJ197272 | JN645797 | - | - |
| D. litchii | SAUCC194.12 | Elaeagnus conferta | MT822540 | MT855737 | MT855854 | MT855625 | MT855509 |
| SAUCC194.22 * | Litchi chinensis | MT822550 | MT855747 | MT855863 | MT855635 | MT855519 | |
| D. longicolla | FAU599 | Glycine max | KJ590728 | KJ610883 | KJ590767 | KJ612124 | KJ659188 |
| D. lutescens | SAUCC194.36 * | Chrysalidocarpus lutescens | MT822564 | MT855761 | MT855877 | MT855647 | MT855533 |
| D. macintoshii | BRIP 55064a* | Rapistrum rugostrum | KJ197289 | KJ197269 | KJ197251 | - | - |
| D. masirevicii | BRIP 57330 | Chrysanthemoides monilifera subsp. Chrysanthemoides monilifera rotundata | KJ197275 | KJ197255 | KJ197237 | - | - |
| BRIP 57892a* | Helianthus annuus | KJ197276 | KJ197257 | KJ197239 | - | - | |
| D. melastomatis | SAUCC194.55 * | Melastoma malabathricum | MT822583 | MT855780 | MT855896 | MT855664 | MT855551 |
| SAUCC194.80 | Millettia reticulata | MT822608 | MT855805 | MT855920 | MT855687 | MT855576 | |
| SAUCC194.88 | Camellia sinensis | MT822616 | MT855813 | MT855928 | MT855695 | MT855584 | |
| D. melonis | CBS 507.78* | Cucumis melo | KC343142 | KC344110 | KC343868 | KC343384 | KC343626 |
| D. miriciae | BRIP 54736j* | Helianthus annuus | KJ197282 | KJ197262 | KJ197244 | - | - |
| D. neilliae | CBS 144.27 | Spiraea sp. | KC343144 | KC344112 | KC343870 | KC343386 | KC343628 |
| D. nigra | JZBH320170 | Ballota nigra | MN653009 | MN887113 | MN892277 | - | - |
| D. nomurai | CBS 157.29 | Morus sp. | KC343154 | KC344122 | KC343880 | KC343396 | KC343638 |
| D. oncostoma | CBS 100454 | Robinia pseudoacacia | KC343160 | KC344128 | KC343886 | KC343402 | KC343644 |
| CBS 109741 | Robinia pseudoacacia | KC343161 | KC344129 | KC343887 | KC343403 | KC343645 | |
| D. ovalispora | ZJUD93* | Citrus limon | KJ490628 | KJ490449 | KJ490507 | - | KJ490570 |
| D. parapterocarpi | CPC 22729 | Pterocarpus brenanii | KJ869138 | KJ869248 | - | - | - |
| D. parvae | PSCG 034* | Pyrus bretschneideri | MK626919 | MK691248 | MK654858 | - | MK726210 |
| D. passifloricola | CPC 27480* | Passiflora foetida | KX228292 | KX228387 | - | - | KX228367 |
| D. penetriteum | LC3353* | Camellia sinensis | KP714505 | KP714529 | KP714517 | - | KP714493 |
| LC3394 | Camellia sinensis | KP267893 | KP293473 | KP267967 | - | KP293544 | |
| D. phaseolorum | CBS 116019 | Caperonia palustris | KC343175 | KC344143 | KC343901 | KC343417 | KC343659 |
| CBS 116020 | Aster exilis | KC343176 | KC344144 | KC343902 | KC343418 | KC343660 | |
| D. phillipsii | CAA 817* | Dead twig | MK792305 | MN000351 | MK828076 | MK883831 | MK871445 |
| D. poincianellae | URM 7932 | Poincianella pyramidalis | MH989509 | MH989537 | MH989538 | MH989540 | MH989539 |
| D. pseudoinconspicua | G26 | Poincianella pyramidalis | MH122538 | MH122524 | MH122533 | MH122528 | MH122517 |
| D. psoraleae | CPC 21634 | Psoralea pinnata | KF777158 | KF777251 | KF777245 | - | - |
| D. pterocarpi | MFLUCC 10-0571 | Pterocarous indicus | JQ619899 | JX275460 | JX275416 | JX197451 | - |
| MFLUCC 10-0575 | Pterocarous indicus | JQ619901 | JX275462 | JX275418 | JX197453 | - | |
| D. pungensis | SAUCC194.89 | Camellia sinensis | MT822617 | MT855814 | MT855929 | MT855696 | MT855585 |
| SAUCC194.112 * | Elaeagnus pungens | MT822640 | MT855837 | MT855952 | MT855719 | MT855607 | |
| D. ravennica | MFLUCC 17-1029 | Tamarix sp. | KY964191 | KY964075 | KY964147 | - | - |
| D. rosae | MFLUCC 17-2658 | Rosa sp. | MG828894 | MG843878 | - | MG829273 | - |
| D. rumicicola | MFLUCC18-0739 | Rumex sp. | MH846233 | MK049555 | MK049554 | - | - |
| D. saccarata | CBS 116311* | Protea repens | KC343190 | KC344158 | KC343916 | KC343432 | KC343674 |
| D. shennongjiaensis | CNUCC 201905 | Juglans regia | MN216229 | MN227012 | MN224672 | MN224551 | MN224560 |
| D. sojae | CBS 100.87* | Glycine soja | KC343196 | KC344164 | KC343922 | KC343438 | KC343680 |
| D. stictica | CBS 370.54 | Buxus sampervirens | KC343212 | KC344180 | KC343938 | KC343454 | KC343696 |
| D. subclavata | ZJUD95* | Citrus unshiu | KJ490630 | KJ490451 | KJ490509 | - | KJ490572 |
| SAUCC194.66 | Pometia pinnata | MT822594 | MT855791 | MT855906 | MT855674 | MT855562 | |
| D. subellipicola | KUMCC 17-0153 | on dead wood | MG746632 | MG746634 | MG746633 | - | - |
| D. tectonendophytica | MFLUCC 13-0471* | Tectona grandis | KU712439 | KU743986 | KU749367 | KU749354 | - |
| SAUCC194.11 | Elaeagnus conferta | MT822539 | MT855736 | MT855853 | MT855624 | MT855508 | |
| SAUCC194.63 | Pometia pinnata | MT822591 | MT855788 | MT855903 | MT855672 | MT855559 | |
| D. ueckerae | FAU656* | Cucumis melo | KJ590726 | KJ610881 | KJ590747 | KJ612122 | KJ659215 |
| D. unshiuensis | CFCC 52595 | Carya illinoensis | MH121530 | MH121607 | MH121572 | MH121448 | MH121488 |
| D. vangueriae | CPC 22703 | Vangueria infausta | KJ869137 | KJ869247 | - | - | - |
| D. velutina | LC4419* | Neolitsea sp. | KX986789 | KX999222 | KX999181 | KX999286 | KX999260 |
| D. virgiliae | CMW40755* | Virgilia oroboides | KP247573 | KP247582 | - | - | - |
| CMW40748 | Virgilia oroboides | KP247566 | KP247575 | - | - | - | |
| D. zaobaisu | PSCG 031* | Pyrus bretschneideri | MK626922 | MK691245 | MK654855 | - | MK726207 |
| Diaporthella corylina | CBS 121124 | Corylus sp. | KC343004 | KC343972 | KC343730 | KC343246 | KC343488 |
Isolates marked with “*” are ex-type or ex-epitype strains.
Notes
Published as part of Sun, Wenxiu, Huang, Shengting, Xia, Jiwen, Zhang, Xiuguo & Li, Zhuang, 2021, Morphological and molecular identification of Diaporthe species in south-western China, with description of eight new species, pp. 65 in MycoKeys 77 on page 65, DOI: 10.3897/mycokeys.77.59852
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- Is part of
- Journal article: 10.3897/mycokeys.77.59852 (DOI)
- Journal article: urn:lsid:plazi.org:pub:5D8D5A6329A4584ABC11C425E4B0E47A (LSID)
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- Journal article: 10.3897/mycokeys.77.59852 (DOI)