Published October 18, 2021
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Table 1 in Characterization of Diaporthe species on Camellia oleifera in Hunan Province, with descriptions of two new species
Authors/Creators
- 1. Forestry Biotechnology Hunan Key Laboratories, Central South University of Forestry and Technology, Changsha 410004, China & The Key Laboratory for Non-Wood Forest Cultivation and Conservation of the Ministry of Education, Central South University of Forestry and Technology, Changsha 410004, China
- 2. Forestry Biotechnology Hunan Key Laboratories, Central South University of Forestry and Technology, Changsha 410004, China
Description
Table 1. Isolates and GenBank accession numbers used in the phylogenetic analyses of Diaporthe.
| Species | Isolate | Host | Location | GenBank accession numbers | ||||
|---|---|---|---|---|---|---|---|---|
| ITS | cal | his3 | tef1 | tub2 | ||||
| D. acericola | MFLUCC 17-0956 | Acer negundo | Italy | KY964224 | KY964137 | NA | KY964180 | KY964074 |
| D. acerigena | CFCC 52554 | Acer tataricum | China | MH121489 | MH121413 | MH121449 | MH121531 | NA |
| D. alangii | CFCC 52556 | Alangium kurzii | China | MH121491 | MH121415 | MH121451 | MH121533 | MH121573 |
| D. alnea | CBS 146.46 | Alnus sp. | Netherlands | KC343008 | KC343250 | KC343492 | KC343734 | KC343976 |
| D. amygdali | CBS 126679 | Prunus dulcis | Portugal | KC343022 | KC343264 | KC343506 | AY343748 | KC343990 |
| D. angelicae | CBS 111592 | Heracleum sphondylium | Austria | KC343027 | KC343269 | KC343511 | KC343753 | KC343995 |
| D. apiculatum | CGMCC 3.17533 | Camellia sinensis | China | KP267896 | NA | NA | KP267970 | KP293476 |
| D. arecae | CBS 161.64 | Areca catechu | India | KC343032 | KC343274 | KC343516 | KC343758 | KC344000 |
| D. arengae | CBS 114979 | Arenga enngleri | Hong Kong | KC343034 | KC343276 | KC343518 | KC343760 | KC344002 |
| D. aseana | MFLUCC 12-0299 | Unknown dead leaf | Thailand | KT459414 | KT459464 | NA | KT459448 | KT459432 |
| D. biguttulata | CGMCC 3.17248 | Citrus limon | China | KJ490582 | NA | KJ490524 | KJ490461 | KJ490403 |
| CFCC 52584 | Juglans regia | China | MH121519 | MH121437 | MH121477 | MH121561 | MH121598 | |
| D. camelliae-oleiferae | HNZZ027 | Camellia oleifera | China | MZ509555 | MZ504685 | MZ504696 | MZ504702 | MZ504718 |
| HNZZ030 | Camellia oleifera | China | MZ509556 | MZ504686 | MZ504697 | MZ504708 | MZ504719 | |
| HNZZ032 | Camellia oleifera | China | MZ509557 | MZ504687 | MZ504698 | MZ504709 | MZ504720 | |
| D. celeris | CPC 28262 | Vitis vinifera | Czech Republic | MG281017 | MG281712 | MG281363 | MG281538 | MG281190 |
| D. celastrina | CBS 139.27 | Celastrus sp. | USA | KC343047 | KC343289 | KC343531 | KC343773 | KC344015 |
| D. cercidis | CFCC 52565 | Cercis chinensis | China | MH121500 | MH121424 | MH121460 | MH121542 | MH121582 |
| D. charlesworthii | BRIP 54884m | Rapistrum rugostrum | Australia | KJ197288 | NA | NA | KJ197250 | KJ197268 |
| D. chrysalidocarpi | SAUCC194.35 | Chrysalidocarpus lutescens | China | MT822563 | MT855646 | MT855532 | MT855876 | MT855760 |
| D. cinnamomi | CFCC 52569 | Cinnamomum sp. | China | MH121504 | NA | MH121464 | MH121546 | MH121586 |
| D. citriasiana | CGMCC 3.15224 | Citrus unshiu | China | JQ954645 | KC357491 | KJ490515 | JQ954663 | KC357459 |
| D. citrichinensis | CGMCC 3.15225 | Citrus sp. | China | JQ954648 | KC357494 | NA | JQ954666 | NA |
| D. collariana | MFLU 17-2770 | Magnolia champaca | Thailand | MG806115 | MG783042 | NA | MG783040 | MG783041 |
| D. conica | CFCC 52571 | Alangium chinense | China | MH121506 | MH121428 | MH121466 | MH121548 | MH121588 |
| D. cucurbitae | CBS 136.25 | Arctium sp. | Unknown | KC343031 | KC343273 | KC343515 | KC343757 | KC343999 |
| D. cuppatea | CBS 117499 | Aspalathus linearis | South Africa | KC343057 | KC343299 | KC343541 | KC343783 | KC344025 |
| D. discoidispora | ZJUD89 | Citrus unshiu | China | KJ490624 | NA | KJ490566 | KJ490503 | KJ490445 |
| D. drenthii | BRIP 66524 | Macadamia sp. | South Africa | MN708229 | NA | NA | MN696526 | MN696537 |
| D. endophytica | CBS 133811 | Schinus terebinthifolius | Brazil | KC343065 | KC343307 | KC343549 | KC343791 | KC343065 |
| D. eres | AR5193 | Ulmus sp. | Germany | KJ210529 | KJ434999 | KJ420850 | KJ210550 | KJ420799 |
| D. fraxini-angustifoliae | BRIP 54781 | Fraxinus angustifolia | Australia | JX862528 | NA | NA | JX862534 | KF170920 |
| D. fraxinicola | CFCC 52582 | Fraxinus chinensis | China | MH121517 | MH121435 | NA | MH121559 | NA |
| D. fructicola | MAFF 246408 | Passiflora edulis × P. edulis f. flavicarpa | Japan | LC342734 | LC342738 | LC342737 | LC342735 | LC342736 |
| D. fusicola | CGMCC 3.17087 | Lithocarpus glabra | China | KF576281 | KF576233 | NA | KF576256 | KF576305 |
| D. ganzhouensis | CFCC 53087 | Unknown | China | MK432665 | MK442985 | MK443010 | MK578139 | MK578065 |
| D. garethjonesii | MFLUCC 12-0542a | Unknown dead leaf | Thailand | KT459423 | KT459470 | NA | KT459457 | KT459441 |
| D. guangxiensis | JZB320094 | Vitis vinifera | China | MK335772 | MK736727 | NA | MK523566 | MK500168 |
| D. helicis | AR5211 | Hedera helix | France | KJ210538 | KJ435043 | KJ420875 | KJ210559 | KJ420828 |
| D. heterostemmatis | SAUCC194.85 | Heterostemma grandiflorum | China | MT822613 | MT855692 | MT855581 | MT855925 | MT855810 |
| D. hubeiensis | JZB320123 | Vitis vinifera | China | MK335809 | MK500235 | NA | MK523570 | MK500148 |
| HNZZ009 | Camellia oleifera | China | MZ509553 | MZ504683 | MZ504694 | MZ504705 | MZ504716 | |
| HNZZ019 | Camellia oleifera | China | MZ509554 | MZ504684 | MZ504695 | MZ504706 | MZ504717 | |
| D. hunanensis | HNZZ023 | Camellia oleifera | China | MZ509550 | MZ504680 | MZ504691 | MZ504702 | MZ504713 |
| HNZZ025 | Camellia oleifera | China | MZ509551 | MZ504681 | MZ504692 | MZ504703 | MZ504714 | |
| HNZZ033 | Camellia oleifera | China | MZ509552 | MZ5046802 | MZ504693 | MZ504704 | MZ504715 | |
| D. kadsurae | CFCC 52586 | Kadsura longipedunculata | China | MH121521 | MH121439 | MH121479 | MH121563 | MH121600 |
| D. litchicola | BRIP 54900 | Litchi chinensis | Australia | JX862533 | NA | NA | JX862539 | KF170925 |
| D. lonicerae | MFLUCC 17-0963 | Lonicera sp. | Italy | KY964190 | KY964116 | NA | KY964146 | KY964073 |
| D. masirevicii | BRIP 57892a | Helianthus annuus | Australia | KJ197277 | NA | NA | KJ197239 | KJ197257 |
| D. miriciae | BRIP 54736j | Helianthus annuus | Australia | KJ197282 | NA | NA | KJ197244 | KJ197262 |
| D. momicola | MFLUCC 16-0113 | Prunus persica | China | KU557563 | KU557611 | NA | KU557631 | KU55758 |
| D. musigena | CBS 129519 | Musa sp. | Australia | KC343143 | KC343385 | KC343627 | KC343869 | KC344111 |
| D. neilliae | CBS 144.27 | Spiraea sp. | USA | KC343144 | KC343386 | KC343628 | KC343870 | KC344112 |
| D. nobilis | CBS 113470 | Castanea sativa | Korea | KC343146 | KC343388 | KC343630 | KC343872 | KC344114 |
| D. oraccinii | CGMCC 3.17531 | Camellia sinensis | China | KP267863 | NA | KP293517 | KP267937 | KP293443 |
| D. ovoicicola | CGMCC 3.17093 | Citrus sp. | China | KF576265 | KF576223 | NA | KF576240 | KF576289 |
| D. pandanicola | MFLU 18-0006 | Pandanus sp. | Thailand | MG646974 | NA | NA | NA | MG646930 |
| D. pascoei | BRIP 54847 | Persea americana | Australia | JX862532 | NA | NA | JX862538 | KF170924 |
| D. passifloricola | CBS 141329 | Passiflora foetida | Malaysia | KX228292 | NA | KX228367 | NA | KX228387 |
| D. penetriteum | CGMCC 3.17532 | Camellia sinensis | China | KP714505 | NA | KP714493 | KP714517 | KP714529 |
| D. perseae | CBS 151.73 | Persea gratissima | Netherlands | KC343173 | KC343415 | KC343657 | KC343899 | KC344141 |
| D. pescicola | MFLUCC 16-0105 | Prunus persica | China | KU557555 | KU557603 | NA | KU557623 | KU557579 |
| D. pseudomangiferae | CBS 101339 | Mangifera indica | Dominican Republic | KC343181 | KC343423 | KC343665 | KC343907 | KC344149 |
| D. pseudophoenicicola | CBS 462.69 | Phoenix dactylifera | Spain | KC343184 | KC343426 | KC343668 | KC343910 | KC344152 |
| D. pulla | CBS 338.89 | Hedera helix | Yugoslavia | KC343152 | KC343394 | KC343636 | KC343878 | KC344120 |
| D. racemosae | CBS 143770 | Euclea racemosa | South Africa | MG600223 | MG600219 | MG600221 | MG600225 | MG600227 |
| D. schimae | CFCC 53103 | Schima superba | China | MK432640 | MK442962 | MK442987 | MK578116 | MK578043 |
| D. schini | CBS 133181 | Schinus terebinthifolius | Brazil | KC343191 | KC343433 | KC343675 | KC343917 | KC344159 |
| D. schoeni | MFLU 15-1279 | Schoenus nigricans | Italy | KY964226 | KY964139 | NA | KY964182 | KY964109 |
| D. searlei | BRIP 66528 | Macadamia sp. | South Africa | MN708231 | NA | NA | NA | MN696540 |
| D. sennicola | CFCC 51634 | Senna bicapsularis | China | KY203722 | KY228873 | KY228879 | KY228883 | KY228889 |
| D. siamensis | MFLUCC 10-573a | Dasymaschalon sp. | Thailand | JQ619879 | NA | NA | JX275393 | JX275429 |
| D. sojae | FAU635 | Glycine max | USA | KJ590719 | KJ612116 | KJ659208 | KJ590762 | KJ610875 |
| HNZZ008 | Camellia oleifera | China | MZ509547 | MZ504677 | MZ504688 | MZ504699 | MZ504710 | |
| HNZZ010 | Camellia oleifera | China | MZ509548 | MZ504678 | MZ504689 | MZ504700 | MZ504711 | |
| HNZZ022 | Camellia oleifera | China | MZ509549 | MZ504679 | MZ504690 | MZ504701 | MZ504712 | |
| D. spinosa | PSCG | Pyrus pyrifolia | China | MK626849 | MK691129 | MK726156 | MK654811 | MK691234 |
| D. sterilis | CBS 136969 | Vaccinium corymbosum | Italy | KJ160579 | KJ160548 | MF418350 | KJ160611 | KJ160528 |
| D. subclavata | ICMP20663 | Citrus unshiu | China | KJ490587 | NA | KJ490529 | KJ490466 | KJ490408 |
| D. subellipicola | MFLU 17-1197 | on dead wood | China | MG746632 | NA | NA | MG746633 | MG746634 |
| D. subordinaria | CBS 464.90 | Plantago lanceolata | New Zealand | KC343214 | KC343456 | KC343698 | KC343940 | KC344182 |
| D. taoicola | MFLUCC 16-0117 | Prunus persica | China | KU557567 | NA | NA | KU557635 | KU557591 |
| D. tectonae | MFLUCC 12-0777 | Tectona grandis | Thailand | KU712430 | KU749345 | NA | KU749359 | KU743977 |
| D. tectonendophytica | MFLUCC 13-0471 | Tectona grandis | Thailand | KU712439 | KU749354 | NA | KU749367 | KU749354 |
| D. tectonigena | MFLUCC 12-0767 | Tectona grandis | Thailand | KU712429 | KU749358 | NA | KU749371 | KU743976 |
| D. terebinthifolii | CBS 133180 | Schinus terebinthifolius | Brazil | KC343216 | KC343458 | KC343700 | KC343942 | KC344184 |
| D. tibetensis | CFCC 51999 | Juglandis regia | China | MF279843 | MF279888 | MF279828 | MF279858 | MF279873 |
| D. tulliensis | BRIP 62248a | Theobroma cacao | Australia | KR936130 | NA | NA | KR936133 | KR936132 |
| D. ukurunduensis | CFCC 52592 | Acer ukurunduense | China | MH121527 | MH121445 | MH121485 | MH121569 | NA |
| D. unshiuensis | CGMCC 3.17569 | Citrus unshiu | China | KJ490587 | NA | KJ490529 | KJ490408 | KJ490466 |
| CFCC 52594 | Carya illinoensis | China | MH121529 | MH121447 | MH121487 | MH121571 | MH121606 | |
| D. viniferae | JZB320071 | Vitis vinifera | China | MK341551 | MK500107 | NA | MK500119 | MK500112 |
| D. xishuangbanica | CGMCC 3.18282 | Camellia sinensis | China | KX986783 | NA | KX999255 | KX999175 | KX999216 |
| D. yunnanensis | CGMCC 3.18289 | Coffea sp. | China | KX986796 | KX999290 | KX999267 | KX999188 | KX999228 |
| Diaporthella corylina | CBS 121124 | Corylus sp. | China | KC343004 | KC343246 | KC343488 | KC343730 | KC343972 |
Note: NA, not applicable. Strains in this study are marked in bold.
Notes
Published as part of Yang, Qin, Tang, Jie & Zhou, Guo Y., 2021, Characterization of Diaporthe species on Camellia oleifera in Hunan Province, with descriptions of two new species, pp. 15 in MycoKeys 84 on page 15, DOI: 10.3897/mycokeys.84.71701
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- Journal article: 10.3897/mycokeys.84.71701 (DOI)
- Journal article: urn:lsid:plazi.org:pub:D929207D8DC95D33AF0CBBBAE2BE14C1 (LSID)
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- Journal article: 10.3897/mycokeys.84.71701 (DOI)