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Published December 23, 2025 | Version v0.5.8

pyPESTO - Parameter EStimation TOolbox for python

Description

  • Optimization
    • Unified interface for x0 parameter (#1654)
    • Unified interface for maxiter and maxeval parameters (#1648)
    • Unified interface for time limits across optimizers (#1638)
    • Make DlibOptimizer solver_epsilon configurable (#1637)
    • Verbosity for CMA optimizer, producing no more outputfiles per default (#1656)
    • Fix startpoint selection and neval in scatter search (#1644)
  • Visualize
    • Fix waterfall axis bug (#1640)
  • Ensemble
    • Fix Plotting uf UMAP and PCA (#1628)
  • Store
    • Updated HDF5 loading (#1636)
  • Sampling
    • Add support for sampling parameter values from prior distributions (#1622)
  • Documentation
    • Reintroduce pymc to documentation (#1643)

Notes

If you use this software, please cite it using these metadata.

Files

ICB-DCM/pyPESTO-v0.5.8.zip

Files (1.8 MB)

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Additional details

Related works

Is supplement to
Software: https://github.com/ICB-DCM/pyPESTO/tree/v0.5.8 (URL)

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