Metagenome assemblies supporting "Eco-evolutionary dynamics of massive, parallel bacteriophage outbreaks in compost communities"

This archive contains metagenome assemblies associated with:

Meijer et al. (2026), "Eco-evolutionary dynamics of massive, parallel
bacteriophage outbreaks in compost communities".

Assemblies were generated from raw metagenomic sequencing data originally
published by Quistad et al. (2020), DOI:10.1098/rstb.2019.0681.

Only assembled sequences are provided here; raw sequencing reads are not
included in this archive.

Directory structure:
- cross_assembly/
  Assemblies generated from combined multi-sample datasets.
- per_sample/
  Assemblies generated independently for each individual sample.

Each FASTA file is the metaSPAdes scaffolds.fasta output, renamed using the
sample or cross-assembly identifier.