Supplementary data files for BiG-SCAPE 2.0 and BiG-SLiCE 2.0 publication

This repository contains the supplementary data and source data files for BiG-SCAPE 2.0 and BiG-SLiCE 2.0 publication:

performance_benchmarks_notebooks.gz: Supplementary scripts used to generate Figure 2, Supplementary tables S3-S5 and Supplementary Figure S8, which are supported by the relevant source data: source_data_performance_benchmarks.tar.gz.

curated_datasets.tar.gz: Benchmarking datasets and curated GCF assignments.

curated_outputs.tar.gz: BiG-SCAPE Cluster and BiG-SLiCE output.

curated_benchmarked.tar.gz: BiG-SCAPE Benchmark output, and supplementary scripts used to generate Figure 2 and Supplementary Figure S8.

ExtStrat_MIBiG.db: BiG-SCAPE 2.0 clustering output for MIBiG BGCs used to generate Supplementary Figure S4 and Supplementary Table S1.

output_as_db_full_spawn_class.tar.gz: BiG-SCAPE 2.0 Cluster output for antiSMASH database 4.0.

as_db_bigslice_out.tar.gz: BiG-SLiCE 2.0 output for antiSMASH database 4.0.

BiG-SCAPE-2.0.0-beta.8.tar.gz, BiG-SCAPE-2.0.0-beta.1.tar.gz: packaged versions of the BiG-SCAPE 2.0 code

bigslice-2.0.0.tar.gz: packaged BiG-SLiCE 2.0 code