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Published December 12, 2025 | Version v0.8.0
Software Open

PEtab-dev/libpetab-python: libpetab-python v0.8.0

Authors/Creators

  • 1. University of Bonn // @ICB-DCM
  • 2. University of Bonn
  • 3. The Francis Crick Insitute
  • 4. @ICB-DCM
  • 5. TNG, Technology Consulting GmbH
  • 6. @PumasAI
  • 7. Heidelberg University
  • 8. IRU Biomathematics @ Uni Bonn
  • 9. RWTH Aachen University

Description

Fixes

  • Handle KeyError in CheckInitialChangeSymbols (by @dweindl in https://github.com/PEtab-dev/libpetab-python/pull/459)
  • Fix return type in petab.v2.calculate (by @dweindl in https://github.com/PEtab-dev/libpetab-python/pull/464)
  • Implement sampling for v2 prior distributions (by @dweindl in https://github.com/PEtab-dev/libpetab-python/pull/461)

Features

  • Add v2.Problem.__repr__ (by @dweindl in https://github.com/PEtab-dev/libpetab-python/pull/458)
  • Add LogUniform distribution (by @dweindl in https://github.com/PEtab-dev/libpetab-python/pull/465)
  • Add v2.Problem.has_{map,ml}_objective (by @dweindl in https://github.com/PEtab-dev/libpetab-python/pull/463)

Other

  • Require Python>=3.11 per nep-0029 (by @dweindl in https://github.com/PEtab-dev/libpetab-python/pull/462)
  • v2: Remove log10-normal distribution per updated spec (by @dweindl in https://github.com/PEtab-dev/libpetab-python/pull/456)
  • Remove petab.v2-is-experimental warnings (by @dweindl in https://github.com/PEtab-dev/libpetab-python/pull/457) It still is, but we no longer spam users with warnings.

Full Changelog: https://github.com/PEtab-dev/libpetab-python/compare/v0.7.0...v0.8.0

Files

PEtab-dev/libpetab-python-v0.8.0.zip

Files (1.6 MB)

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md5:20396dbca4443e842b84d678719466ae
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Additional details

Related works

Is supplement to
Software: https://github.com/PEtab-dev/libpetab-python/tree/v0.8.0 (URL)

Software

Repository URL
https://github.com/PEtab-dev/libpetab-python