Published December 11, 2025
| Version v1.0.1--2025-12-10
Software
Open
enterovirus-phylo/nextclade_d68: Enterovirus D68 Nextclade Dataset v1.0.1
Authors/Creators
-
1.
Swiss Tropical and Public Health Institute
-
2.
University of Basel
-
3.
SIB Swiss Institute of Bioinformatics
- 4. Vall d'Hebron Hospital Universitari
- 5. European Society for Clinical Virology
Description
Minor updates
This release includes:
- Alignment improvements: Fixed gap extension penalty and enabled reverse-complement handling in
pathogen. json - Tree topology update: Recomputed ML phylogenetic tree
- Regenerated mutation labels for all clades
- Updated reference sequences
Credits
- Nextstrain and Nextclade teams for tools and support
- ENPEN (European Non-Polio Enterovirus Network) for collaboration and feedback
Related: See Nextclade Data release notes
Full Changelog: https://github.com/enterovirus-phylo/nextclade_d68/compare/v1.0.0--2025-11-18...v1.0.1--2025-12-10
Files
enterovirus-phylo/nextclade_d68-v1.0.1--2025-12-10.zip
Files
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Additional details
Related works
- Is supplement to
- Software: https://github.com/enterovirus-phylo/nextclade_d68/tree/v1.0.1--2025-12-10 (URL)
Software
- Repository URL
- https://github.com/enterovirus-phylo/nextclade_d68