Published June 1, 2023
| Version 1
Dataset
Open
kaken2 database of primate genomes for host decontamination
Authors/Creators
Description
kraken2 database of primate genomes. Used in Nephele pipelines for decontamination of metagenomic datasets from primate host reads (inclusive of human genome).
Contained assemblies:
- Homo sapiens (GRCh38.p14),
- Macaca mulatta (Mmul_10),
- Macaca fascicularis (MFA1912RKSv2),
- Macaca nemestrina (Mnem_1.0),
- Cercocebus atys (Caty_1.0),
- Pan troglodytes (NHGRI_mPanTro3-v1.1-hic.freeze_pri),
- Pan paniscus (NHGRI_mPanPan1-v1.1-0.1.freeze_pri),
- Gorilla gorilla (NHGRI_mGorGor1-v1.1-0.2.freeze_pri),
- Pongo pygmaeus (NHGRI_mPonPyg2-v1.1-hic.freeze_pri),
- Callithrix jacchus (mCalJa1.2.pat.X)
Files
Files
(15.4 GB)
| Name | Size | Download all |
|---|---|---|
|
md5:2b7be983f3d2153234e48059cd30fa2f
|
15.4 GB | Download |
Additional details
Dates
- Available
-
2023-06-01