kraken2 database of rodent genomes for host decontamination

kraken2 database of rodent genomes. Used in Nephele pipelines for decontamination of metagenomic datasets from rodent host reads (incl. mouse and human).

Contained assemblies:

• Homo sapiens (assembly version GRCh38.p14),
• Mesocricetus auratus (BCM_Maur_2.0); and
• Mesocricetus auratus (MesAur1.0),
• Mustela putorius furo (ASM1176430v1.1),
• Mustela nigripes (MUSNIG.SB6536),
• Mustela erminea (mMusErm1.Pri),
• Mustela nivalis (MusNiv_Pri1.0),
• Mus musculus (GRCm39),
• Mus caroli ( CAROLI_EIJ_v1.1),
• Mus pahari (PAHARI_EIJ_v1.1)