Published December 9, 2025
| Version v1
Dataset
Open
RegEvol: detection of directional selection in regulatory sequences through phenotypic predictions and phenotype-to-fitness functions
Authors/Creators
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1.
University of Lausanne
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2.
SIB Swiss Institute of Bioinformatics
Description
Datasets from the paper
“RegEvol: detection of directional selection in regulatory sequences through phenotypic predictions and phenotype-to-fitness functions”
The repository includes:
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BSgenomes used to generate matched negative sequences for model training: BSgenomes.tar.gz
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RegEvol result tables for the analysed ChIP-seq peaks across 11 species: ChIP_peaks_RegEvol_exact_ranked.Rds
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RegEvol result tables for the analysed Drosophila melanogaster modERN peaks: drosophila_modERN_RegEvol_exact_ranked.Rds
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Substitution matrices per chromosome from PhyML for each analysed species
Files
Files
(4.7 GB)
| Name | Size | Download all |
|---|---|---|
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md5:1cf2194952b7b688eb28d7ef3afd71ed
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3.9 GB | Download |
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md5:7072382dbcca90ca1ee24c378a33da39
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165.9 MB | Download |
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md5:5cff0c79969a005c123e40bf7761249d
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683.1 MB | Download |
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md5:bc6bd79f8613e144aaf76961c1379b66
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20.4 kB | Download |
Additional details
Related works
- Is described by
- Publication: 10.1101/2025.11.26.690685 (DOI)
Funding
- Swiss National Science Foundation
- Selection on gene expression at different time scales and vertebrate Evo-Devo 207853
Software
- Repository URL
- https://github.com/mrrlab/RegEvol