Published December 5, 2025 | Version v1
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Dual mode MS2Deepscore model (MS2DeepScore >2.6)

  • 1. ROR icon Wageningen University & Research

Description

MS2DeepScore model compatible with MS2DeepScore >=2.6.

An MS2Deepscore model trained on both positive and negative ionisation mode spectra. It is suitable to predict chemical similarity between two mass spectra, both between the same ionmode, but also between positive and negative ion mode spectra. See https://github.com/matchms/ms2deepscore and https://www.biorxiv.org/content/10.1101/2024.03.25.586580v5 for more details. 

Files

embedding_model_settings.json

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