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Published November 25, 2025 | Version 0.5.0
Software Open

akikuno/TSUMUGI-dev: 0.5.0

Authors/Creators

  • 1. University of Tsukuba

Description

v0.5.0 (2025-11-25)

🌟 New Features

  • CLI tooling suite added for offline/pipe-friendly workflows:
    • tsumugi run (main pipeline)
    • tsumugi mp --include/--exclude
    • tsumugi n-phenos --pairwise --min --max
    • tsumugi n-phenos --genewise --min --max
    • tsumugi genes --keep --drop
    • tsumugi life-stage --keep --drop
    • tsumugi sex --keep --drop
    • tsumugi zygosity --keep --drop
    • tsumugi build-webapp
    • tsumugi build-graphml

📝 Documentation

  • README updated with CLI option descriptions and multilingual links (Japanese, Korean, Simplified/Traditional Chinese, Hindi, Indonesian, Vietnamese, Spanish, French, German, Portuguese).

Files

akikuno/TSUMUGI-dev-0.5.0.zip

Files (2.2 MB)

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Additional details

Related works

Is supplement to
Software: https://github.com/akikuno/TSUMUGI-dev/tree/0.5.0 (URL)

Software

Repository URL
https://github.com/akikuno/TSUMUGI-dev