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Published November 14, 2025 | Version v43

Dataset for drevalpy

  • 1. Technische Universität München
  • 2. ROR icon Freie Universität Berlin

Description

All preprocessing details can be found in https://github.com/daisybio/preprocess_drp_data
or at https://github.com/daisybio/drevalpy

News:

  • The pEC50s were shifted by -6 because of the code update -> now corrected.
  • Meta now contains the gene lists, so they don't have to be duplicated
  • 2 new datasets: BeatAML2 and PDX_Bruna
  • Corrected wrong original AUC values of CTRPv2
  • Added MolGNet model to meta
  • Updated gene lists: intersection gene lists now also intersect BeatAML2 and PDX_Bruna. Reduced gene lists only contain genes contained in all datasets. 

Files

BeatAML2.zip

Files (5.5 GB)

Name Size
md5:e76faf5a2cd41a38007892707e02d8b7
2.7 GB Preview Download
md5:abafa1496cdb80f1d13402d0ba7b5833
159.0 MB Preview Download
md5:2f819a24e0671da29e9533ad90701c7b
363.6 MB Preview Download
md5:3d53d1e5d95d256944639c139a4d6f58
405.3 MB Preview Download
md5:d393e9cc10aaba14193ff4ef1dc66b2f
512.9 MB Preview Download
md5:5805bd087dcaef40abfe06034b04b178
540.7 MB Preview Download
md5:e91d6a1df6b09985f54ce0478feee650
515.3 MB Preview Download
md5:9088853103ebaec9700bcf741d4ed13a
10.5 MB Preview Download
md5:ff1708e48b853e95bca19d1f33949c70
213.3 MB Download
md5:dcf2dcf95952d7bf2af945e4d85486ba
49.3 MB Preview Download
md5:65fa7e8503ff41500e9fe0d2803edf70
44.0 MB Preview Download
md5:12cc862d08404ddb4ca0fa8915d797fd
44.4 MB Preview Download

Additional details

Related works

Is supplement to
Preprint: 10.1101/2025.05.26.655288v1 (DOI)