Published October 29, 2025 | Version v1

The colorful giants: Revisiting the systematics of the Anolis latifrons series (Squamata: Anolidae)

  • 1. Laboratorio de Macroecología Evolutiva, Red de Biología Evolutiva, Instituto de Ecología A.C., Veracruz, Mexico
  • 2. Universidad de Antioquia UdeA, Medellín, Colombia

Description

Abstract

The lizard genus Anolis is the second most diverse genus of terrestrial vertebrates. Within Anolis, the highly speciose clade Dactyloa comprises six species series, including the latifrons series. Despite previous efforts to reconstruct its phylogeny, earlier studies have excluded a substantial proportion of the clade's species diversity. Here, we integrated both historical and newly generated genetic data to reconstruct the most comprehensive molecular phylogeny of the latifrons series to date including 88% of the current species diversity. We also conducted a thorough morphological examination of museum specimens representing ten species, primarily distributed in Colombia, including vouchers of A. danieli from the Central Cordillera used in previous molecular phylogenies. Our phylogeny also included genetic samples of A. danieli from several localities in the Western Cordillera, samples of Anolis limon and A. mirus (two species previously lacking genetic data), and sequences from the Central American species A. kathydayae and A. brooksi. Our results recovered topological differences for A. limon and A. mirus compared to previous hypotheses and revealed that specimens assigned to A. danieli in earlier studies were misidentified and are not phylogenetically related to this species. Instead, our results showed that the true A. danieli is sister to a green anole clade distributed across the Central Cordillera, Pacific region, and Panama. Based on our phylogenetic and genetic distance analyses, we conclude that A. kathydayae should be considered a junior synonym of A. brooksi. Lastly, we describe the taxon previously confused with A. danieli and comment on the taxonomic implications of our findings.

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References

  • Ayala-Varela F, Valverde S, Poe S, Narváez AE, Yánez-Muñoz MH, Torres-Carvajal O (2021) A new giant anole (Squamata: Iguanidae: Dactyloinae) from southwestern Ecuador. Zootaxa 4991: 295–317. https://doi.org/10.11646/zootaxa.4991.2.4
  • Ayala-Varela FP, Velasco JA (2010) A new species of dactyloid anole (Squamata: Iguanidae) from the western Andes of Ecuador. Zootaxa 2577: 46–56. https://doi.org/10.11646/zootaxa.2577.1.2
  • Batista A, Vesely M, Mebert K, Lotzkat S, Köhler G (2015) A new species of Dactyloa from eastern Panama, with comments on other Dactyloa species present in the region. Zootaxa 4039: 57–84. https://doi.org/10.11646/zootaxa.4039.1.2
  • Boschman LM (2021) Andean mountain building since the Late Cretaceous: A paleoelevation reconstruction. Earth-Science Reviews 220: 103640. https://doi.org/10.1016/j.earscirev.2021.103640
  • Castañeda M, de Queiroz K (2011) Phylogenetic relationships of the Dactyloa clade of Anolis lizards based on nuclear and mitochondrial DNA sequence data. Molecular Phylogenetics and Evolution 61: 784–800. https://doi.org/10.1016/j.ympev.2011.07.004
  • Castañeda M, de Queiroz K (2013) Phylogeny of the Dactyloa clade of Anolis lizards: New insights from combining morphological and molecular data. Bulletin of the Museum of Comparative Zoology 160: 345–398. https://doi.org/10.3099/0027-4100-160.7.345
  • Christodoulides N, Urgiles VL, Guayasamín JM, Savage AE (2024) Selection and gene duplication associated with high-elevation diversification in Pristimantis, the largest terrestrial vertebrate genus. Genome Biology and Evolution 16: evae167. https://doi.org/10.1093/gbe/evae167
  • Etheridge R (1960) The relationships of the anoles (Reptilia: Sauria: Iguanidae): An interpretation based on skeletal morphology. PhD Thesis, University of Michigan, Ann Arbor, MI, 236 pp.
  • Firkowski CR, Bornschein MR, Ribeiro LF, Pie MR (2016) Species delimitation, phylogeny and evolutionary demography of co-distributed, montane frogs in the southern Brazilian Atlantic Forest. Molecular Phylogenetics and Evolution 100: 345–360. https://doi.org/10.1016/j.ympev.2016.04.023
  • Grisales-Martínez FA, Velasco JA, Bolívar W, Williams EE, Daza JM (2017) The taxonomic and phylogenetic status of some poorly known Anolis species from the Andes of Colombia with the description of a nomen nudum taxon. Zootaxa 4303: 213–230. https://doi.org/10.11646/zootaxa.4303.2.2
  • Jombart T (2008) adegenet: A R package for the multivariate analysis of genetic markers. Bioinformatics 24: 1403–1405. https://doi.org/10.1093/bioinformatics/btn129
  • Jombart T, Devillard S, Balloux F (2010) Discriminant analysis of principal components: A new method for the analysis of genetically structured populations. BMC Genetics 11: 94. https://doi.org/10.1186/1471-2156-11-94
  • Kalyaanamoorthy S, Minh BQ, Wong TKF, von Haeseler A, Jermiin LS (2017) ModelFinder: Fast model selection for accurate phylogenetic estimates. Nature Methods 14: 587–589. https://doi.org/10.1038/nmeth.4285
  • Katoh K, Standley DM (2013) MAFFT multiple sequence alignment software version 7: Improvements in performance and usability. Molecular Biology and Evolution 30: 772–780. https://doi.org/10.1093/molbev/mst010
  • Köhler G (2014) Characters of external morphology used in Anolis taxonomy – Definition of terms, advice on usage, and illustrated examples. Zootaxa 3774: 201–257. https://doi.org/10.11646/zootaxa.3774.3.1
  • Köhler G, Sunyer J (2008) Two new species of anoles formerly referred to as Anolis limifrons (Squamata: Polychrotidae). Herpetologica 64: 92–108. https://doi.org/10.1655/07-027.1
  • Marín CM, Vásquez-Restrepo JD, Sepúlveda JD, Daza JM (2017) On geographic distribution and morphological variation of the poorly known lizard Anolis anoriensis Velasco, Gutiérrez-Cárdenas & Quintero-Angel. Herpetology Notes 10: 643–645.
  • Minh BQ, Nguyen MAT, von Haeseler A (2013) Ultrafast approximation for phylogenetic bootstrap. Molecular Biology and Evolution 30: 1188–1195. https://doi.org/10.1093/molbev/mst024
  • Minh BQ, Schmidt HA, Chernomor O, Schrempf D, Woodhams MD, von Haeseler A, Lanfear R (2020) IQ-TREE 2: New models and efficient methods for phylogenetic inference in the genomic era. Molecular Biology and Evolution 37: 1530–1534. https://doi.org/10.1093/molbev/msaa015
  • Molina Zuluaga C, Gutiérrez Cárdenas DA (2007) Uso nocturno de perchas en dos especies de Anolis (Squamata: Polychrotidae) en un bosque Andino de Colombia. Papéis Avulsos de Zoologia 47: 273–281. https://doi.org/10.1590/s0031-10492007002200001
  • Moreno-Arias RA, Méndez-Galeano MA, Beltrán I, Vargas-Ramírez M (2023) Revealing anole diversity in the highlands of the Northern Andes: New and resurrected species of the Anolis heterodermus species group. Vertebrate Zoology 73: 161–188. https://doi.org/10.3897/vz.73.e94265
  • Palumbi SR (1996) Nucleic acids II: The polymerase chain reaction. In: Hillis DM, Moritz C, Mable BK (Eds) Molecular Systematics, Second Edition. Sinauer Associates, Sunderland, MA, 205–221.
  • Paradis E, Claude J, Strimmer K (2004) APE: Analyses of phylogenetics and evolution in R language. Bioinformatics 20: 289–290. https://doi.org/10.1093/bioinformatics/btg412
  • Poe S (2004) Phylogeny of anoles. Herpetological Monographs 18: 37–­89. https://doi.org/10.1655/0733-1347(2004)018[0037:POA]2.0.CO;2
  • Poe S, Latella I, Ayala-Varela F, Yañez-Miranda C, Torres-Carvajal O (2015) A new species of phenacosaur Anolis (Squamata; Iguanidae) from Peru and a comprehensive phylogeny of Dactyloa-clade anolis based on new DNA sequences and morphology. Ichthyology & Herpetology 103: 639. https://doi.org/10.1643/CH-14-127
  • Poe S, Nieto-Montes de Oca A, Torres-Carvajal O, de Queiroz K, Velasco JA, Truett B, Gray LN, Ryan MJ, Köhler G, Ayala-Varela F, Latella I (2017) A phylogenetic, biogeographic, and taxonomic study of all extant species of Anolis (Squamata; Iguanidae). Systematic Biology 66: 663–697. https://doi.org/10.1093/sysbio/syx029
  • Poe S, Ryan MJ (2017) Description of two new species similar to Anolis insignis (Squamata: Iguanidae) and resurrection of Anolis (Diaphoranolis) brooksi. Amphibian & Reptile Conservation 11: 1–16.
  • Ponce M, Köhler G (2008) Morphological variation in anoles related to Anolis kemptoni in Panama. Salamandra 44: 65–83.
  • Prates I, Melo-Sampaio PR, Drummond L de O, Teixeira M, Rodrigues MT, Carnaval AC (2017) Biogeographic links between southern Atlantic Forest and western South America: Rediscovery, re-description, and phylogenetic relationships of two rare montane anole lizards from Brazil. Molecular Phylogenetics and Evolution 113: 49–58. https://doi.org/10.1016/j.ympev.2017.05.009
  • Prates I, Melo-Sampaio PR, Queiroz K De, Carnaval AC, Rodrigues MT, Drummond LDO (2020) Discovery of a new species of Anolis lizards from Brazil and its implications for the historical biogeography of montane Atlantic Forest endemics. Amphibia Reptilia 41: 87–103. https://doi.org/10.1163/15685381-20191179
  • R Core Team (2025) R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna. https://www.R-project.org
  • Rivero EI, Velozo P, Rojas-Runjaic F (2009) Primer registro del lagarto Anolis apollinaris, para Venezuela. Boletín del Centro de Investigaciones Biológicas 43: 299–304.
  • Santos JC, Coloma LA, Cannatella DC (2003) Multiple, recurring origins of aposematism and diet specialization in poison frogs. Proceedings of the National Academy of Sciences of the USA 100: 12792–12797. https://doi.org/10.1073/pnas.2133521100
  • Santos JC, Coloma LA, Summers K, Caldwell JP, Ree R, Cannatella DC (2009) Amazonian amphibian diversity is primarily derived from Late Miocene Andean lineages. PLoS Biology 7: e1000056. https://doi.org/10.1371/journal.pbio.1000056
  • Savage JM, Guyer C (1989) Infrageneric classification and species composition of the anole genera, Anolis, Ctenonotus, Dactyloa, Norops and Semiurus (Sauria: Iguanidae. Amphibia-Reptilia 10: 105–116.
  • Savage JM, Talbot JJ (1978) The giant anoline lizards of Costa Rica and western Panama. Copeia 1978: 480–492. https://doi.org/10.2307/1443615
  • Torres-Carvajal O, Ayala-Varela FP, Lobos SE, Poe S, Narváez AE (2018) Two new Andean species of Anolis lizard (Iguanidae: Dactyloinae) from southern Ecuador. Journal of Natural History 52: 1067–1089. https://doi.org/10.1080/00222933.2017.1391343
  • Uetz P, Freed P, Aguilar R, Reyes F, Hošek J (Eds) (2023) The Reptile Database. http://www.reptile-database.org [accessed 5 Jun 2025].
  • Velasco JA, Hoyos JM (2010) Phylogenetic analysis of the latifrons series of Anolis (Sauria: Iguania) with morphological data. Anolis Newsletter VI: 203–212.
  • Velasco JA, Hurtado-Gómez JP (2014) A new green anole lizard of the Dactyloa clade (Squamata: Dactyloidae) from the Magdalena River valley of Colombia. Zootaxa 3785: 201–216. https://doi.org/10.11646/zootaxa.3785.2.4
  • Velasco JA, Villalobos F, Diniz-Filho JAF, Poe S, Flores-Villela O (2020) Macroecology and macroevolution of body size in Anolis lizards. Ecography 43: 812–822. https://doi.org/10.1111/ecog.04583
  • Williams EE (1975) South American Anolis: Anolis parilis, new species, near A. mirus. Breviora 434: 1–8.
  • Williams EE (1976) South American anoles: The species groups. Papéis Avulsos de Zoologia 29: 259–268.
  • Williams EE (1988) New or problematic Anolis from Colombia. V. Anolis danieli, a new species of the latifrons species group and a reassessment of Anolis apollinaris Boulenger, 1919. Breviora 489: 1–25.
  • Williams EE, Rand H, Rand S, O'Hara R (1995) A computer approach to the comparison and identification of species in difficult taxonomic groups. Breviora 502: 1–47.
  • Yánez-Muñoz MH, Reyes-Puig C, Reyes-Puig JP, Velasco JA, Ayala-Varela F, TorresCarvajal O (2018) A new cryptic species of Anolis lizard from northwestern South America (Iguanidae, Dac­ty­loinae). ZooKeys 2018: 135–163. https://doi.org/10.3897/zookeys.794.26936
  • Zambrano DF, Gutierrez W, Zuñiga-Baos J, Cano K, Parra RM, Bernal MH (2024) New distribution records, morphology and natural history notes of the endemic Colombian lizard Anolis limon. Herpetological Bulletin 169: 7–11. https://doi.org/10.33256/hb169.711