Published October 28, 2025 | Version v1
Dataset Open

Data and code associated with 'Estimating the reduction in genetic diversity from background selection under non-equilibrium demography and partial selfing'

  • 1. EDMO icon Uppsala University

Description

This repository contains data and code to fit background selection (BGS) models to simulations and genome sequence data from Capsella grandiflora and C. orientalis. Please see the BGS_README.md for a description of the files and how to run simulations and fit models.

Files

BGS_README.md

Files (715.9 MB)

Name Size Download all
md5:1a85adf19f2627d5c4a5c0e56bfcd070
7.9 kB Preview Download
md5:03a6aa946fd90e518f9b0abab60e06a6
13.2 kB Download
md5:f698486a5110f14acb29d6ed8c1e8a13
69.0 kB Download
md5:fbf0581021cd0a824a8391334ef27583
818.1 kB Download
md5:095a9266ca3dadfe93e5fbf68fac856a
474.7 kB Download
md5:27b0a80eff753662b4e3da115025ec8c
623.8 kB Download
md5:c36413f02deabbc1c172d23415a8adc1
10.5 kB Preview Download
md5:4910244b9955a5eca05f10ea0d73b347
7.2 kB Preview Download
md5:47319733c17639a7aac29d04a2679df8
8.2 kB Preview Download
md5:f18965a1264ffc535a82390eb47510a2
3.2 kB Preview Download
md5:e58eb1927810473f8790009d16191ea8
21 Bytes Preview Download
md5:8a07b6a41021a5e7694694569c08a545
3.6 kB Preview Download
md5:d3c5da65c39aa1339dacac0385782845
3.7 kB Preview Download
md5:1f0baa4e6029e74f9d6cf3c3b007b70b
2.6 kB Preview Download
md5:a3ead40d3dd3e2b1bd3425f372cde4e2
2.7 kB Download
md5:e03348f3f7b7656c7f468a6312360bc3
2.8 kB Download
md5:53ebf74e86739b1254505abbc7c26bb2
2.8 kB Download
md5:f5a84091f1be2bd10c311b02d6252a39
2.8 kB Download
md5:9871775eff4f9ac47609f13f22e5778f
2.9 kB Download
md5:27c7ec85a1dc9fda7517acd2f93fe2fb
2.2 kB Download
md5:7e5e1ba84ef73ac4d01ed5f4e94ad40d
2.2 kB Download
md5:b5cb7f2c7d734a76bd189b2aab311e32
10.2 MB Download
md5:e092273b9603a50d9969d93cbdbb3f32
4.2 MB Download
md5:f7320a547652b300243bf525d74fcf7c
160 Bytes Preview Download
md5:688462f4d5a17baad1101ae71f5a3f9e
352 Bytes Preview Download
md5:dd087c968fd07d2947d73fa3c65fba84
686.9 MB Download
md5:5feb77d0db97b214f218aa79c8d8ccdd
2.3 kB Download
md5:dc72b9ff5a4e6583e26563f4f9c48a6b
3.0 kB Download
md5:32e0f7b5aeeff4289c9ab2c30d6897cd
3.0 kB Download
md5:8932c9fe2c7488d368725d030882f8c5
2.3 kB Download
md5:284884b3797c304504af2d1fee244a30
2.3 kB Download
md5:740ec2668495f0da8c0fa1302c1acd48
6.2 MB Download
md5:d7a476a96b4ac98819bc2a21f7dff589
2.3 kB Download
md5:554e0deb80e85b43b965ad79d7c97efe
3.0 kB Download
md5:0bf7b0de27ce66ab4e59a10edc8176c7
2.3 kB Download
md5:c7314368f061faec7613f63613073b4c
2.3 kB Download
md5:b68d11eb0ed30d8fc7f5cb0bcb2285dd
6.2 MB Download
md5:c323e126124c363c5e827d714b55734d
7.1 kB Download

Additional details

Software

Repository URL
https://github.com/A-J-F-Mackintosh/Binfer
Programming language
Python