Published January 24, 2022 | Version v1
Model Open

Unmyelinated fiber segmentation model release

  • 1. ROR icon Indiana University Indianapolis
  • 2. Indiana University - Purdue University

Description

Model release for the paper, two variants are available:

  • umf_segmentation_release.zip with the original model used to generate the segmentation maps in the paper
  • umf_release_data.zip with a scaled-up version (v2) of the original model, doubling the parameters but keeping the same U-Net architecture.
  • umf_release_ensemble.zip containing a multi-resolution ensemble implemented in the ensemble section of the repository, more accurate and robust to distribution shifts.

Details on the ensemble model are reported in the PhD thesis "Unraveling Complexity: Panoptic Segmentation in Cellular and Space Imagery" [Plebani2024] (IU Scholarworks mirror).

Files

umf_release_data.zip

Files (573.2 MB)

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md5:5a571cfb03e595ca40445807de6738b9
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Additional details

Software

Repository URL
https://github.com/Banus/umf_unet
Programming language
MATLAB , Python
Development Status
Inactive