Published October 28, 2028 | Version v1
Dataset Embargoed

Single-cell profiling identifies a pathogenic Msx2⁺ VSMC subpopulation underlying aortic arch-specific vascular calcification

  • 1. Guangzhou Medical University, School of Basic Medical Sciences

Contributors

Researcher:

Supervisor:

  • 1. Guangzhou Medical University, School of Basic Medical Sciences, Guangzhou, China
  • 2. Guangzhou Medical University, Sino-French Hoffmann Institute (SFHI), School of Basic Medical Sciences, Guangzhou, China

Description

This study investigates why the aortic arch is more prone to calcification than the descending aorta. Vascular calcification is a serious condition with no effective treatment, where blood vessel cells become similar to bone-forming cells. We used single-cell RNA sequencing on a mouse model of vitamin D-induced calcification to compare these two aortic regions. Our key discovery was a specific subpopulation of Msx2-positive vascular smooth muscle cells that is uniquely found in the aortic arch and appears to drive its increased calcification. This finding provides new insights into the cellular basis of regional calcification differences and could lead to new therapeutic targets.

Methods

Vascular calcification was induced in mice via subcutaneous injection of high-dose vitamin D3 (vD3). The treatment group received vD3 (5×10^5 IU/kg/day; Sigma-Aldrich, #PHR1237) dissolved in the vehicle, while the control group received the vehicle alone. Injections were administered for three consecutive days. Animals were euthanized, and aortic tissues were collected at two time points: day 4 and day 7 after the first injection.

Single-cell suspensions were prepared from pooled aortic arch (AA) or descending thoracic aorta (DTA) segments (n=6 pools per group). Briefly, aortas were dissected from mice at day 0, 4, and 7 post-vitamin D3 treatment, cleaned of adherent tissues in HBSS under a stereomicroscope, and segmented into AA and DTA. Tissues from the same type and time point were pooled, minced, and enzymatically digested at 37°C using a solution of collagenase type I and dispase. The dissociated cell suspension was then triturated, filtered through a 70-μm strainer, and centrifuged. The resulting cell pellet was resuspended, and cell viability was confirmed to be >80% prior to single-cell library preparation.

Technical info

Raw sequencing reads were processed using the 10x Genomics Cell Ranger pipeline for demultiplexing, alignment to the reference genome (e.g., mm10), cell barcode assignment, and unique molecular identifier (UMI) counting to generate the final gene expression matrix.

Files

Embargoed

The files will be made publicly available on October 28, 2028.

Reason: These data will be released after the manuscript published.

Additional details

Funding

National Natural Science Foundation of China
PFKFB3-driven glycolysis in vascular smooth muscle cells promotes vascular calcification in chronic kidney disease 82370421
National Natural Science Foundation of China
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