Published February 3, 2026
| Version v1
Dataset
Open
SDT files for begomovirus percent nucletotide identity comparisons
Authors/Creators
-
1.
Rutgers, The State University of New Jersey
Description
Files produced by SDT v1.3 comparing the percent nucleotide identities for 25 datasets of begomovirus DNA-A (or whole genome homologous to the DNA-A of bipartite begomoviruses). These data were used to calculate averages in the manuscript "Begomovirus species demarcation based on genome-sequence identity yields non-monophyletic species: a case study of sweet potato-infecting begomoviruses." The GenBank accession numbers for all analyzed sequences are given in the files (which can be viewed in a text editor as well as the SDT software).
Files
Files
(39.1 MB)
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md5:3281537beb325999a8b5a4c06f032bb7
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612.8 kB | Download |
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md5:f8edbbc501291144c72873d29c9743b5
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339.1 kB | Download |
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md5:1ddb684165c518a950ad5b3657015e33
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645.1 kB | Download |
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md5:7a25d587efaf9475e78a7d354e7dea40
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957.3 kB | Download |
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md5:f14c98a666e5b22fa7394c5dade77c40
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398.2 kB | Download |
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md5:3bdec1ca383c3a39d10ec0bbd722e880
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1.0 MB | Download |
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md5:33e409f6afdf63b406ed1f4b55777240
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696.5 kB | Download |
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md5:0ba41fefbac4cc0f3135a9743379453a
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347.8 kB | Download |
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md5:d35ce94ab6896bd41de14ff7b53c0252
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885.1 kB | Download |
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md5:ecda3cd23d12f34cf9bd3e3a79e3f879
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217.3 kB | Download |
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md5:f6b6e793d657ae9fa7d358f54af6d58d
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451.2 kB | Download |
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md5:4b2d3956f30850a79b3ccb376715e8d1
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224.9 kB | Download |
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md5:fc65228d8d39fca1c7a2da0085c59a61
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491.4 kB | Download |
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md5:4a491dcae24b36e1abb25ad6584cbf63
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306.1 kB | Download |
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md5:9363a314dc9eb0b63f8bf44dd647e5a9
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266.4 kB | Download |
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md5:406b36e7a8fc63362da8ed9000fac101
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125.4 kB | Download |
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md5:2de67a4e2774258b18e7d6962fef88a8
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832.7 kB | Download |
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md5:b295acc5c7095b4a747adb2135aa132f
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450.0 kB | Download |
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md5:c0efa65d70ff6c772365bbad7c8816cc
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6.6 MB | Download |
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md5:a8df79333e102bbbe5bcb9b24624c354
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280.8 kB | Download |
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md5:8eaf94c68e7a2d6287b0c9a6d9dfa831
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1.2 MB | Download |
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md5:36fcfcce1e9ef95737f800b84ce3f3a0
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134.3 kB | Download |
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md5:8072dcd94b1bb8d23b9bef143495bb0c
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346.4 kB | Download |
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md5:84c59640808606fda6c8faf21924184a
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20.7 MB | Download |
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md5:18397c397968ff82f335a5e1313148eb
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618.2 kB | Download |