MetaboStat-AgromiX

Metabolomics Statistical Analysis_Metatoul-AgromiX

A comprehensive Shiny application for statistical analysis of metabolomics, proteomics, and transcriptomics data. Dedicated to students or researchers.

Features
- Data preprocessing (imputation, normalization, transformation, scaling)
- Univariate analysis (ANOVA, t-tests, volcano plots)
- Multivariate analysis (PCA, PLS-DA, sPLS-DA)
- Interactive visualizations
- Export results (CSV, PDF)

Installation
```r
# Required packages
install.packages(c("shiny", "shinyjs", "shinythemes", "dplyr", "ggplot2", 
                   "mixOmics", "MetabolAnalyze", "vegan", "cluster", 
                   "ggrepel", "ggpubr", "multcompView", "DT"))

Installation (if the first method fails)

Use "InstallPackage-Stat-Omics.r" script

Run the app

under Rstudio, open "MetaboStat_AgromiX_1.251011_app.R"

launch the shiny interface via "Run App"