CCR Collaborative Bioinformatics Resource [CCBR]
Published June 8, 2026 | Version v2.7.6
Software Open

RENEE: Rna sEquencing aNalysis pipElinE

Authors/Creators

  • 1. Advanced Biomedical Computational Science, Frederick National Laboratory for Cancer Research, Frederick, MD 21702, USA

Description

RENEE 2.7.6

Bug Fixes

  • Python 3.12 Compatibility: Fixed ModuleNotFoundError: No module named 'rpds.rpds' when running on Python 3.12 (#282)
    • Upgraded ccbr_tools to v0.5.3 which includes a lazy-import fix for cffconvert to prevent loading the rpds C extension until the citation feature is actually needed
    • This allows RENEE to run on Python 3.12 without import errors

Related Issues & PRs

  • Closes #282
  • PR #283: Upgrade ccbr_tools to v0.5.3
  • Upstream: CCBR/Tools#182

For installation and usage instructions, visit: https://ccbr.github.io/RENEE/

Notes

Please cite RENEE as below.

Files

CCBR/RENEE-v2.7.6.zip

Files (11.1 MB)

Name Size Download all
md5:c199cbf2f7b69b829460d029254d2f69
11.1 MB Preview Download

Additional details

Related works

Is supplement to
Software: https://github.com/CCBR/RENEE/tree/v2.7.6 (URL)

Software

Repository URL
https://github.com/CCBR/RENEE