Published September 23, 2025 | Version 2.0.0
Software Open

ms609/TreeTools: v2.0.0

Authors/Creators

  • 1. Department of Earth Sciences, Durham University
  • 2. @actions
  • 3. @posit-pbc

Description

New functionality

  • Cherries() counts the cherries in a binary tree.
  • New method as.Splits.integer().
  • Add methods for NULL objects.

Fixes and enhancements

  • Fix RoguePlot(sort = TRUE) Rogue#33.
  • Remove R.cache dependency: UnrootedKeys() now uses a native cache implementation.

Backward incompatible changes

  • Require R 3.6.
  • Remove deprecated functions AllDescendantEdges(), .EnforceOutgroup(), ForestSplits(), in.Splits(), PhylogeneticInfo(), SpectrumLegend(), SplitNumber(), TreeSplits().
  • Remove deprecated C++ macro TREETOOLS_SPLITLIST_INIT.

Files

ms609/TreeTools-2.0.0.zip

Files (1.1 MB)

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Additional details

Related works

Is supplement to
Software: https://github.com/ms609/TreeTools/tree/2.0.0 (URL)

Software

Repository URL
https://github.com/ms609/TreeTools