Published September 22, 2025 | Version v3
Dataset Open

Training data for MaxQuant and Msstats label-free analysis in Galaxy

  • 1. Institute for Surgical Pathology, Medical Center - University of Freiburg

Description

The files serve as input and intermediate results for a MaxQuant and Msstats training on skin cancer tissues (https://doi.org/10.1016/j.matbio.2017.11.004) in the Galaxy training network (https://training.galaxyproject.org).

Input files: human FASTA database for Maxquant. Annotation file and comparison matrix file for Msstats.

Intermediate result files: MaxQuant protein groups, evidence and PTXQC.

Files

PTXQC report.pdf

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