FANTASIA v4.0 Results on CAFA3 Evaluation

This repository contains the results of the FANTASIA functional annotation pipeline evaluated on the CAFA3 benchmark dataset. The evaluation includes both No-knowledge and Partial-knowledge settings, covering the complete evaluation set as defined in the CAFA Evaluator Wiki.

The dataset includes:

• fantasia_results_cafa3.zip: Predicted annotations generated with FANTASIA.

• cafa3_evaluation.zip: Processed evaluation outputs.

• cafa3_gt.tsv: Ground truth annotations.

• cafa3_gt.fasta: Ground truth protein sequences.