Published September 4, 2025
| Version 2.0.1 XR
Model
Open
TSXR-V2-R001
Authors/Creators
Contributors
Researcher (2):
Description
This dataset comprises models that extend the modality support of the TotalSegmentator2D tool (TS2D) to X-ray images.
The model checkpoints have been trained on the v2.0.1 TotalSegmentator dataset using DiffDRR to synthesize X-ray images and constitute the initial release (R001). The checkpoints were generated using nnU-Net, which is also used within TS2D for inference.
Each model was trained on a specific subset of labels from the DiffDRR generated synthetic TotalSegmentator dataset.
This release includes:
- Cardiac: 18 cardiovascular structures, including heart and major arteries.
- Muscles: 23 musculoskeletal structures, including the brain and spinal-cord, and also multiple skeletal structures.
- Organs: 24 organ structures, including lungs, liver and stomach.
- Ribs: 26 ribs, including sternum and costal-cartilages.
- Vertebrae: 26 vertebrae, including the sacrum.
Synthesized data was created at three attenuation levels (1, 3 and 6) to allow for a more robust training of each respective model.
Files
tsxr-v2-ep1000b2_cardiac.zip
Files
(1.3 GB)
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md5:e8bd6bbbcf954d50e0a4be2e3aae1408
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md5:82d54a9c63d44ee8b8d89dbb653d0b61
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Additional details
Related works
- Cites
- Publication: 10.1007/978-3-031-23179-7_1 (DOI)
- Publication: 10.1148/ryai.230024 (DOI)
- Is derived from
- Dataset: 10.5281/zenodo.6802614 (DOI)
- Is published in
- Conference paper: 10.1007/978-3-031-98688-8_11 (DOI)
Funding
- Austrian Research Promotion Agency
- MEDUSA 872604
- Upper Austrian Research
Software
- Repository URL
- https://github.com/risc-mi/totalsegmentator2D
- Programming language
- Python
- Development Status
- Active