There is a newer version of the record available.

Published August 22, 2025 | Version v1.13.2
Software Open

AstrobioMike/bit: v1.13.2

Authors/Creators

  • 1. NASA Ames Research Center

Description

  • updates to bit-kraken2-to-taxon-summaries
    • modularized
    • no longer takes the larger kraken.out file, it now works off of the kraken.report
    • no longer works based on taxid lookup, it now works based on the taxonomy in the kraken report
      • this means it will exactly match the taxonomy used in the kraken2 db, and not swap anything if taxids or rank names changed
      • also means it works with GTDB-kraken2-db produced reports (which previously would not work with the standard taxid lookup method)

Files

AstrobioMike/bit-v1.13.2.zip

Files (681.1 kB)

Name Size Download all
md5:19decf78e59d895055bc3cacf8ab11aa
681.1 kB Preview Download

Additional details

Related works

Is supplement to
Software: https://github.com/AstrobioMike/bit/tree/v1.13.2 (URL)

Software

Repository URL
https://github.com/AstrobioMike/bit