Published August 21, 2025
| Version v1
Dataset
Open
M. genitalium AlphaFold3 pairs vs pools
Authors/Creators
-
1.
ETH Zurich
Description
To study the effect of pooling, we randomly partitioned M. gen proteins into five groups. We used the groups to generate all pairwise interactions, and pools of 2k, 3k, 4k and 5k tokens. Pairs and pools were run with AlphaFold v3.0.1 using default settings on A100 GPUs with 80GB memory.
Files
MD5SUM.txt
Files
(197.0 GB)
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md5:da3638b16657c41ef47ca7f0b8659b4a
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md5:3b550294325da2f005b75e99aea23f04
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69.3 GB | Download |
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md5:4ad931ed4d5f6e930e8da3249e78873e
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38.6 GB | Download |
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md5:c05b78328e6e3dc3a547edd5bc887b01
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27.2 GB | Download |
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md5:fbed8a2373f1db3e4e4004ad99cfe117
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27.9 GB | Download |
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md5:6288dedc9e1a00a2b66cedda1d880286
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34.0 GB | Download |
Additional details
Related works
- Is supplement to
- Preprint: 10.1101/2025.07.01.662654 (DOI)
Software
- Repository URL
- https://github.com/jurgjn/mgen-pairs-pools