There is a newer version of the record available.

Published May 16, 2023 | Version v2.2.1
Software Open

epi2me-labs/wf-metagenomics: v2.2.1

Authors/Creators

  • 1. Oxford Nanopore Technologies
  • 2. @Birkbeck
  • 3. @nanoporetech

Description

Added

  • A new option min_read_qual to filter by quality score.
  • Configuration for running demo data in AWS
  • AWS configuration for external kraken2_server for demonstration at LC23

Fixed

  • Fix minimum and maximum length read filter.

Removed

  • Default region and AWS CLI path for AWS batch profile

Files

epi2me-labs/wf-metagenomics-v2.2.1.zip

Files (26.8 MB)

Name Size
md5:10197577b4af15a544b4a919f634499c
26.8 MB Preview Download

Additional details

Related works

Is supplement to
Software: https://github.com/epi2me-labs/wf-metagenomics/tree/v2.2.1 (URL)

Software

Repository URL
https://github.com/epi2me-labs/wf-metagenomics