There is a newer version of the record available.

Published April 6, 2023 | Version v2.1.0
Software Open

epi2me-labs/wf-metagenomics: v2.1.0

Authors/Creators

  • 1. Oxford Nanopore Technologies
  • 2. @Birkbeck
  • 3. @nanoporetech

Description

Updated

  • New fastqingress.
  • New report with ezcharts.

Added

  • Stacked barplot for most abundant taxa.
  • Show rank information in abundance tables.
  • Export function from tables.

Fixed

  • Fix crash in the report with one sequence in the fastq.
  • Use kraken2 with parallelization in single client.

Files

epi2me-labs/wf-metagenomics-v2.1.0.zip

Files (13.5 MB)

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md5:494b43a722a1b05d69159cb6933f6274
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Additional details

Related works

Is supplement to
Software: https://github.com/epi2me-labs/wf-metagenomics/tree/v2.1.0 (URL)

Software

Repository URL
https://github.com/epi2me-labs/wf-metagenomics