There is a newer version of the record available.

Published December 12, 2023 | Version v1.0.0
Software Open

epi2me-labs/wf-transcriptomes: v1.0.0

Authors/Creators

  • 1. @Birkbeck
  • 2. Oxford Nanopore Technologies
  • 3. @nanoporetech
  • 4. @nanoporetech, @epi2me-labs

Description

Added

  • Published minimap2 and pychopper results to output directory.
  • Two extra pychopper parameters --cdna_kit and --pychopper_backend. --pychopper_options is still available to define any other options.
  • Memory requirements for each process.

Changed

  • Documentation.

Fixed

  • When Jaffa is run only output one report.

Files

epi2me-labs/wf-transcriptomes-v1.0.0.zip

Files (124.4 MB)

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md5:038d6ee69e51118e3ee8f50f125cf5af
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Additional details

Related works

Is supplement to
Software: https://github.com/epi2me-labs/wf-transcriptomes/tree/v1.0.0 (URL)

Software

Repository URL
https://github.com/epi2me-labs/wf-transcriptomes