There is a newer version of the record available.

Published July 15, 2024 | Version v2.3.0
Software Open

epi2me-labs/wf-human-variation: v2.3.0

Authors/Creators

  • 1. @nanoporetech
  • 2. Oxford Nanopore Technologies
  • 3. @Birkbeck
  • 4. @LooseLab

Description

Removed

  • --basecaller_cfg is now redundant as the workflow automatically detects the basecall model from the input data since v2.2.0.

Added

  • --override_basecaller_cfg parameter allows users to provide a basecall configuration name in cases where automatic basecall model detection fails.

Changed

  • ClinVar version in SnpEff container updated to version 20240708.
  • Updated demo data.

Files

epi2me-labs/wf-human-variation-v2.3.0.zip

Files (2.2 MB)

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md5:4c50fb99ab3ba2e7f247b677fbe959da
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Additional details

Related works

Is supplement to
Software: https://github.com/epi2me-labs/wf-human-variation/tree/v2.3.0 (URL)

Software

Repository URL
https://github.com/epi2me-labs/wf-human-variation