Published April 12, 2024 | Version v1.1.3
Software Open

epi2me-labs/wf-16s: v1.1.3

Authors/Creators

  • 1. @nanoporetech
  • 2. Oxford Nanopore Technologies

Description

Added

  • Reads below percentages of identity (min_percent_identity) and the reference covered (min_ref_coverage) are considered as unclassified in the minimap2 approach.

Fixed

  • Files that are empty following the fastcat filtering are discarded from downstream analyses.

Changed

  • Bump to wf-metagenomics v2.9.4
  • bam folder within output has been renamed to bams

Files

epi2me-labs/wf-16s-v1.1.3.zip

Files (56.6 kB)

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md5:6aeed8628742c34787626354b0bf48b4
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Additional details

Related works

Is supplement to
Software: https://github.com/epi2me-labs/wf-16s/tree/v1.1.3 (URL)

Software

Repository URL
https://github.com/epi2me-labs/wf-16s