Published July 31, 2025
| Version v1
Journal
Open
PIEZO channels link mechanical forces to uterine contractions in parturition (single nuclei RNA-seq)
Description
Analysis for single cell RNA-seq data in the study, including the analysis for human, non-pregnant mouse and pregnant mouse uterus.
- Human myometrium in labor
- Request access for data from dbGaP phs001885.v5.p1
- Download data using the download_data.sh script.
- Map transcripts using cellranger
- Analyze the data using the R script
- Mouse non-pregnant uterus
- Download processed matrices from ArrayExpress E-MTAB-11491
- Analyze the data using the R script
- Mouse GD18 uterus
- Analyze the data from Single Cell Portal (SCP2924)
- Process the data using the R script
Files
Files
(806.4 MB)
| Name | Size | Download all |
|---|---|---|
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md5:0bb7bff17e77470f819d3f4d17196738
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806.4 MB | Download |
Additional details
Funding
- Damon Runyon Cancer Research Foundation
- DRG-2405-20
- Howard Hughes Medical Institute
- National Institutes of Health
- R01AT012051
- National Institutes of Health
- R35 NS105067
Dates
- Submitted
-
2025-08-01