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Published November 14, 2016 | Version 0.3.6

thierrygosselin/assigner: **v.0.3.6**

  • 1. Université Laval
  • 2. NOAA, Southwest Fisheries Science Center
  • 3. Universite Laval

Description

v.0.3.6

  • bug fix assignment_ngs during imputations, the imputation module could not recognise that REF/ALT alleles are not necessary or usefull for assignment analysis. *enhancement to assignment_ngs and assignment_mixture so that when marker.number include "all" the iteration.method is set automatically to 1 when conducting the assignment with all the markers. Iterations at this point is useless and a waist of time.
  • random seed number is now stored in the appropriate files.
  • assignment_mixture: with assignment.analysis = "gsi_sim the unknown/mixture samples are compared with baseline populations using common markers between the pair. Now, the tables include the number of markers used. The summary provides the mean number of markers. This number will change each time randomness is used.

Files

thierrygosselin/assigner-0.3.6.zip

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