Published April 1, 2015 | Version v1.0.1
Software Open

sprspace: sprspace v1.0.1

Authors/Creators

  • 1. Fred Hutchinson Cancer Research Center

Description

This is a collection of shell and perl scripts for quantifying MCMC (Markov chain Monte Carlo) exploration of subtree prune-and-regraft tree space in MrBayes posteriors.

For more information see: Chris Whidden and Frederick A. Matsen IV. (2015). Quantifying MCMC Exploration of Phylogenetic Tree Space. Systematic Biology. First published online: January 27, 2015. doi:10.1093/sysbio/syv006 .

This version includes some bug fixes but was mostly released to generate a DOI via Zenodo.

Files

sprspace-v1.0.1.zip

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Additional details

Related works

Is supplement to
https://github.com/cwhidden/sprspace/tree/v1.0.1 (URL)