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Published June 19, 2025 | Version v3
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Supplementary Materials associated with paper 'Physalia mikazuki sp. nov. (Phylum Cnidaria; Class Hydrozoa) Blown into Japan's Northeast (Tohoku): at the Whim of Marine Ecosystem Change'

Authors/Creators

  • 1. ROR icon Tohoku University

Description

This is a repository for supporting figures associated with paper 'Physalia mikazuki sp. nov. (Phylum Cnidaria; Class Hydrozoa) Blown into Japan's Northeast (Tohoku): at the Whim of Marine Ecosystem Change'

Table of contents (English)

Figure S1: Sightings and public reports of Physalia spp. in Japan;

Table S1: List of Physalia spp. and outgroup siphonophore species included in this study with corresponding mitochondrial sequence data.

Figures S2 and S3: Full sequence-level resolution Maximum-Likelihood trees for mitochondrial 16S and COI regions.

Tree Files: Newick (.nwk) format tree files of Maximum Likelihood trees generated with IQ-TREE for the main analysis (16S and COI) and additional ML trees constructed in MEGA for topology support comparison.

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Supplementary_Figure_S2_16S.jpg

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References

  • Trifinopoulos J, Nguyen LT, von Haeseler A, Minh BQ (2016) Nucl. Acids Res. 44 (W1): W232-W235. https://doi.org/10.1093/nar/gkw256
  • Diep Thi Hoang, Olga Chernomor, Arndt von Haeseler, Bui Quang Minh, and Le Sy Vinh (2017) UFBoot2: Improving the ultrafast bootstrap approximation. Mol Biol Evol, in press. https://doi.org/10.1093/molbev/msx281
  • Church, S. H.; Abedon, R. B.; Ahuja, N.; Anthony, C. J.; Ramirez, D. A.; Rojas, L. M.; Albinsson, M. E.; Álvarez Trasobares, I.; Bergemann, R. E.; Bogdanovic, O., Global genomics of the man-o'-war (Physalia) reveals biodiversity at the ocean surface. bioRxiv https://doi.org/10.1101/2024.07.10.602499
  • Stecher G., Tamura K., and Kumar S. (2020). Molecular Evolutionary Genetics Analysis (MEGA) for macOS. Molecular Biology and Evolution 37:1237-1239.
  • Sudhir Kumar, Glen Stecher, Michael Suleski, Maxwell Sanderford, Sudip Sharma, Koichiro Tamura, MEGA12: Molecular Evolutionary Genetic Analysis Version 12 for Adaptive and Green Computing, Molecular Biology and Evolution, Volume 41, Issue 12, December 2024, msae263, https://doi.org/10.1093/molbev/msae263
  • Maria Anisimova, Manuel Gil, Jean-François Dufayard, Christophe Dessimoz, Olivier Gascuel, Survey of Branch Support Methods Demonstrates Accuracy, Power, and Robustness of Fast Likelihood-based Approximation Schemes, Systematic Biology, Volume 60, Issue 5, October 2011, Pages 685–699, https://doi.org/10.1093/sysbio/syr041