Published April 18, 2025 | Version v1
Data paper Open

Investigating the determinants of performance in machine learning for protein fitness prediction

  • 1. EDMO icon Australian National University
  • 2. ROR icon ARC Centre of Excellence for Innovations in Peptide and Protein Science
  • 3. EDMO icon University of New South Wales
  • 4. ROR icon ARC Centre of Excellence in Synthetic Biology

Description

Code for evaluating ML architectures on NK fitness landscapes, benchmarking interpolation, extrapolation, ablation, and positional extrapolation performance.

Files

nk-ml.zip

Files (475.2 MB)

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Additional details

Dates

Submitted
2025-04-18

Software

Repository URL
https://github.com/RSCJacksonLab/nk-ml
Programming language
Python