Published May 27, 2025
| Version v0.3.6
Software
Open
github.com/iwc-workflows/Assembly-Hifi-HiC-phasing-VGP4/main
Authors/Creators
- 1. The Pennsylvania State University Eberly College of Science
Description
Assemble Genome using PacBio HiFi and HiC data from the same individual for phasing. Prerequisite: Run k-mer profiling workflow (VGP1). This workflow uses HiFiasm for contigging, and generates assembly statistics, BUSCO reports, Merqury histograms, and the genome assembly contigs in fasta and GFA format.
Files
github.com-iwc-workflows-Assembly-Hifi-HiC-phasing-VGP4-main_v0.3.6.zip
Files
(21.4 kB)
| Name | Size | Download all |
|---|---|---|
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md5:22b8f7c44c99c9ce1d6573e23039b5cb
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21.4 kB | Preview Download |
Additional details
Related works
- Is identical to
- https://dockstore.org/aliases/workflow-versions/10.5281-zenodo.15530630 (URL)
- https://dockstore.org/workflows/github.com/iwc-workflows/Assembly-Hifi-HiC-phasing-VGP4/main:v0.3.6 (URL)
- https://dockstore.org/api/ga4gh/trs/v2/tools/%23workflow%2Fgithub.com%2Fiwc-workflows%2FAssembly-Hifi-HiC-phasing-VGP4%2Fmain/versions/v0.3.6/PLAIN-gxformat2/descriptor/Assembly-Hifi-HiC-phasing-VGP4.ga (URL)