There is a newer version of the record available.

Published May 21, 2025 | Version v35

Dataset for drevalpy

  • 1. Technische Universität München
  • 2. ROR icon Freie Universität Berlin

Description

All preprocessing details can be found in https://github.com/daisybio/preprocess_drp_data
or at https://github.com/daisybio/drevalpy

News:

Updated proteomics data -> now no longer transformed, normalized, and filtered. The data we provide was processed like this now:

  1. Raw data from the DIA screen (PRIDE: PXD030304) for 949 cell lines with 3-10 replicates was downloaded
  2. It was filtered to be proteotypic and a global Q value <=0.01
  3. The max LFQ was calculated with the diann R package
  4. The cell line names were mapped

Files

all_results.zip

Files (5.1 GB)

Name Size
md5:4f63fe4d36b83a42bdd10c3b97d6b661
2.7 GB Preview Download
md5:be5b6881e14dc587a4972e1597083ab2
363.8 MB Preview Download
md5:fd7ce044f67ca4bdf2e53d3d39509fdb
403.6 MB Preview Download
md5:96d5823b2bdd315505aeaff7f3496a80
514.5 MB Preview Download
md5:7772e57169f5e2528be78d055b67690f
538.9 MB Preview Download
md5:761100d4212570d8c186bdb2f19e9151
514.0 MB Preview Download
md5:39aa43dd152806ab58a35065bb268ba5
10.4 MB Preview Download
md5:50133915d66dc93a9aea48812e690dbf
43.4 MB Preview Download
md5:7c36fc6868b2df07242122e17e8e2208
43.9 MB Preview Download