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Published May 16, 2025 | Version v2.4.1.1
Software Open

github.com/broadinstitute/viral-pipelines/classify_single

Authors/Creators

Description

Runs raw reads through taxonomic classification (Kraken2), human read depletion (based on Kraken2), de novo assembly (SPAdes), and FASTQC/multiQC of reads.

Files

github.com-broadinstitute-viral-pipelines-classify_single_v2.4.1.1.zip

Files (61.8 kB)

Additional details

Related works

Is identical to
https://dockstore.org/aliases/workflow-versions/10.5281-zenodo.15428527 (URL)
https://dockstore.org/workflows/github.com/broadinstitute/viral-pipelines/classify_single:v2.4.1.1 (URL)
https://dockstore.org/api/ga4gh/trs/v2/tools/%23workflow%2Fgithub.com%2Fbroadinstitute%2Fviral-pipelines%2Fclassify_single/versions/v2.4.1.1/PLAIN-WDL/descriptor/classify_single.wdl (URL)