Published May 11, 2025
| Version v1.0.2
Software
Open
bibymaths/codonanalyzer: v1.0.2
Authors/Creators
Description
๐ CodonAnalyzer v1.0.2 โ 2025-05-12
This is the first tested and reproducible release of CodonAnalyzer, now versioned v1.0.2. The pipeline has been successfully modularized, automated with Snakemake, and documented for public use. ๐
โ What's New
- ๐ Snakemake Workflow: Fully linked rules from raw FASTA to hydropathy plots.
- ๐งพ Configurable Pipeline:
config.yamlallows easy input switching and script directory definition. - ๐งฌ Updated Perl Scripts: Codon, ORF, translation, and hydropathy modules tested and standardized.
- ๐ Hydropathy Plotting: Added Python script
plot_hydro.pyfor visualizing profiles.
Thanks to everyone who contributed to reviving and polishing this classic bioinformatics project.
Files
bibymaths/codonanalyzer-v1.0.2.zip
Files
(2.7 MB)
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md5:fa3780e8c0c80e6077042911c048f078
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Additional details
Related works
- Is supplement to
- Software: https://github.com/bibymaths/codonanalyzer/tree/v1.0.2 (URL)
Software
- Repository URL
- https://github.com/bibymaths/codonanalyzer