Ersilia Model Hub: a repository of AI/ML models for infectious and neglected tropical diseases

What's Changed

• Bump abatilo/actions-poetry from 3.0.1 to 4.0.0 by @dependabot in https://github.com/ersilia-os/ersilia/pull/1530
• Testing Playground Refactor by @Abellegese in https://github.com/ersilia-os/ersilia/pull/1528
• fix nox config by @DhanshreeA in https://github.com/ersilia-os/ersilia/pull/1545
• Bump actions/upload-artifact from 4.5.0 to 4.6.0 by @dependabot in https://github.com/ersilia-os/ersilia/pull/1529
• Resolve duplication of values in CSV serialization by @DhanshreeA in https://github.com/ersilia-os/ersilia/pull/1543
• Test command refactor by @DhanshreeA in https://github.com/ersilia-os/ersilia/pull/1506
• remove unnecessary input filtering by @DhanshreeA in https://github.com/ersilia-os/ersilia/pull/1546
• Clean up redundant dummy models and circle ci config by @DhanshreeA in https://github.com/ersilia-os/ersilia/pull/1548
• Bug fixes h5 by @Abellegese in https://github.com/ersilia-os/ersilia/pull/1547
• Fix/bug wrong input handling by @OlawumiSalaam in https://github.com/ersilia-os/ersilia/pull/1550
• Handle BentoML errors & clean up failed models by @OlawumiSalaam in https://github.com/ersilia-os/ersilia/pull/1527
• hotfix:make airtable conn work by @DhanshreeA in https://github.com/ersilia-os/ersilia/pull/1554
• workflow fox by @Abellegese in https://github.com/ersilia-os/ersilia/pull/1557
• Revert "hotfix:make airtable conn work" by @GemmaTuron in https://github.com/ersilia-os/ersilia/pull/1558
• Parallel session fix by @Abellegese in https://github.com/ersilia-os/ersilia/pull/1559
• Fix/incorrect header mapping by @OlawumiSalaam in https://github.com/ersilia-os/ersilia/pull/1556
• Packing with Ersilia Pack now resolved columns from columns file name, avoiding issues with schema resolution by @miquelduranfrigola in https://github.com/ersilia-os/ersilia/pull/1563
• bentoml used only when necessary by @miquelduranfrigola in https://github.com/ersilia-os/ersilia/pull/1565
• pre commit fixes by @miquelduranfrigola in https://github.com/ersilia-os/ersilia/pull/1567
• test command refactor wip 0 by @GemmaTuron in https://github.com/ersilia-os/ersilia/pull/1568
• update metadata with newest fields (commented out) by @GemmaTuron in https://github.com/ersilia-os/ersilia/pull/1570
• fix BI exceptions, Create class to update metadata from airtable, rea… by @GemmaTuron in https://github.com/ersilia-os/ersilia/pull/1572
• Refactor/v2 test command refactoring by @GemmaTuron in https://github.com/ersilia-os/ersilia/pull/1578
• Redis cache setup by @Abellegese in https://github.com/ersilia-os/ersilia/pull/1579
• pack resolver from metadata and docker client setting by @GemmaTuron in https://github.com/ersilia-os/ersilia/pull/1582
• Fix for arm image endpoint issue by @Abellegese in https://github.com/ersilia-os/ersilia/pull/1591
• Ultimate arm image error fix by @Abellegese in https://github.com/ersilia-os/ersilia/pull/1593
• refactoring codes which creates _logs from container by @Abellegese in https://github.com/ersilia-os/ersilia/pull/1585
• fix date by @GemmaTuron in https://github.com/ersilia-os/ersilia/pull/1594
• Redis configuration support by @Abellegese in https://github.com/ersilia-os/ersilia/pull/1596
• resolves issue (#1586): batching and h5, json support in std runner by @Abellegese in https://github.com/ersilia-os/ersilia/pull/1588
• parsing fix for model output by @Abellegese in https://github.com/ersilia-os/ersilia/pull/1597
• deprecating isaura by @Abellegese in https://github.com/ersilia-os/ersilia/pull/1599
• fix: hdf5 proper string parsing by @Abellegese in https://github.com/ersilia-os/ersilia/pull/1603
• Fix test‑command deep‑flag, H5 string serialization, and adopt log‑scale input sizing for performance by @Abellegese in https://github.com/ersilia-os/ersilia/pull/1606
• Dimension based empty value filling in hdf5 file by @Abellegese in https://github.com/ersilia-os/ersilia/pull/1607
• update test workflows for ersilia cli by @GemmaTuron in https://github.com/ersilia-os/ersilia/pull/1613
• Tracking for splunk by @miquelduranfrigola in https://github.com/ersilia-os/ersilia/pull/1616
• Eliminate input shape requeriment by @GemmaTuron in https://github.com/ersilia-os/ersilia/pull/1621
• bugfix getting metadata from github by @GemmaTuron in https://github.com/ersilia-os/ersilia/pull/1624
• Refactor/integrating gdi caching by @Abellegese in https://github.com/ersilia-os/ersilia/pull/1635
• remove auth command by @miquelduranfrigola in https://github.com/ersilia-os/ersilia/pull/1628

Full Changelog: https://github.com/ersilia-os/ersilia/compare/v0.1.41...v0.1.44